Protein–RNA interactions for Protein: P53677

AP3M2, AP-3 complex subunit mu-2, humanhuman

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3M2P53677 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP3M2P53677 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP3M2P53677 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP3M2P53677 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
AP3M2P53677 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP3M2P53677 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
AP3M2P53677 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP3M2P53677 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.28■□□□□ 0.68
AP3M2P53677 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.28■□□□□ 0.68
AP3M2P53677 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.28■□□□□ 0.68
AP3M2P53677 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.28■□□□□ 0.68
AP3M2P53677 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.28■□□□□ 0.68
AP3M2P53677 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.28■□□□□ 0.68
AP3M2P53677 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP3M2P53677 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
AP3M2P53677 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.28■□□□□ 0.68
AP3M2P53677 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.28■□□□□ 0.68
AP3M2P53677 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP3M2P53677 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP3M2P53677 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP3M2P53677 AC233702.3-201ENST00000578656 1387 ntBASIC19.28■□□□□ 0.68
AP3M2P53677 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP3M2P53677 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
AP3M2P53677 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.28■□□□□ 0.68
AP3M2P53677 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP3M2P53677 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
AP3M2P53677 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
AP3M2P53677 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.27■□□□□ 0.68
AP3M2P53677 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
AP3M2P53677 NOC2LP2-201ENST00000407594 1944 ntBASIC19.27■□□□□ 0.68
AP3M2P53677 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP3M2P53677 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP3M2P53677 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP3M2P53677 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP3M2P53677 AC125634.1-201ENST00000438758 1403 ntBASIC19.27■□□□□ 0.68
AP3M2P53677 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.27■□□□□ 0.68
AP3M2P53677 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP3M2P53677 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
AP3M2P53677 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP3M2P53677 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP3M2P53677 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.27■□□□□ 0.68
AP3M2P53677 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.27■□□□□ 0.68
AP3M2P53677 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.27■□□□□ 0.68
AP3M2P53677 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.27■□□□□ 0.68
AP3M2P53677 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.27■□□□□ 0.68
AP3M2P53677 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.27■□□□□ 0.68
AP3M2P53677 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
AP3M2P53677 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
AP3M2P53677 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.27■□□□□ 0.68
AP3M2P53677 AC092329.2-201ENST00000598402 547 ntBASIC19.27■□□□□ 0.68
AP3M2P53677 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP3M2P53677 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.27■□□□□ 0.68
AP3M2P53677 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
AP3M2P53677 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.27■□□□□ 0.68
AP3M2P53677 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
AP3M2P53677 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP3M2P53677 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP3M2P53677 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
AP3M2P53677 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
AP3M2P53677 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
AP3M2P53677 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
AP3M2P53677 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.27■□□□□ 0.67
AP3M2P53677 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
AP3M2P53677 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.26■□□□□ 0.67
AP3M2P53677 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.26■□□□□ 0.67
AP3M2P53677 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.26■□□□□ 0.67
AP3M2P53677 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
AP3M2P53677 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP3M2P53677 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
AP3M2P53677 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
AP3M2P53677 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
AP3M2P53677 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
AP3M2P53677 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
AP3M2P53677 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
AP3M2P53677 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP3M2P53677 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.26■□□□□ 0.67
AP3M2P53677 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.26■□□□□ 0.67
AP3M2P53677 TOB2P1-201ENST00000469761 992 ntBASIC19.26■□□□□ 0.67
AP3M2P53677 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.26■□□□□ 0.67
AP3M2P53677 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.26■□□□□ 0.67
AP3M2P53677 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.26■□□□□ 0.67
AP3M2P53677 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.26■□□□□ 0.67
AP3M2P53677 AL138831.2-201ENST00000606564 490 ntBASIC19.26■□□□□ 0.67
AP3M2P53677 AC093458.2-201ENST00000623150 629 ntBASIC19.26■□□□□ 0.67
AP3M2P53677 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
AP3M2P53677 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
AP3M2P53677 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP3M2P53677 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.26■□□□□ 0.67
AP3M2P53677 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP3M2P53677 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP3M2P53677 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP3M2P53677 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
AP3M2P53677 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.26■□□□□ 0.67
AP3M2P53677 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP3M2P53677 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP3M2P53677 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.25■□□□□ 0.67
AP3M2P53677 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
AP3M2P53677 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.25■□□□□ 0.67
AP3M2P53677 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
AP3M2P53677 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms