Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.37■□□□□ 0.21
HMGA2P52926 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMGA2P52926 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMGA2P52926 PRORSD1P-201ENST00000295112 541 ntBASIC16.37■□□□□ 0.21
HMGA2P52926 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HMGA2P52926 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HMGA2P52926 PVRIG2P-201ENST00000435460 978 ntBASIC16.37■□□□□ 0.21
HMGA2P52926 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.37■□□□□ 0.21
HMGA2P52926 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HMGA2P52926 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.37■□□□□ 0.21
HMGA2P52926 MIR3917-201ENST00000580971 93 ntBASIC16.37■□□□□ 0.21
HMGA2P52926 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMGA2P52926 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.37■□□□□ 0.21
HMGA2P52926 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.37■□□□□ 0.21
HMGA2P52926 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMGA2P52926 AL118508.1-201ENST00000613502 2345 ntBASIC16.37■□□□□ 0.21
HMGA2P52926 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMGA2P52926 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMGA2P52926 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.37■□□□□ 0.21
HMGA2P52926 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMGA2P52926 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMGA2P52926 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HMGA2P52926 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.37■□□□□ 0.21
HMGA2P52926 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMGA2P52926 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMGA2P52926 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMGA2P52926 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMGA2P52926 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
HMGA2P52926 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.36■□□□□ 0.21
HMGA2P52926 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMGA2P52926 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMGA2P52926 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.36■□□□□ 0.21
HMGA2P52926 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMGA2P52926 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HMGA2P52926 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMGA2P52926 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMGA2P52926 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.36■□□□□ 0.21
HMGA2P52926 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMGA2P52926 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMGA2P52926 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMGA2P52926 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMGA2P52926 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMGA2P52926 TSPY14P-201ENST00000303979 915 ntBASIC16.36■□□□□ 0.21
HMGA2P52926 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
HMGA2P52926 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
HMGA2P52926 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMGA2P52926 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.36■□□□□ 0.21
HMGA2P52926 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMGA2P52926 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HMGA2P52926 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.36■□□□□ 0.21
HMGA2P52926 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
HMGA2P52926 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMGA2P52926 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
HMGA2P52926 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
HMGA2P52926 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMGA2P52926 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMGA2P52926 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HMGA2P52926 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMGA2P52926 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMGA2P52926 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
HMGA2P52926 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
HMGA2P52926 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.35■□□□□ 0.21
HMGA2P52926 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGA2P52926 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGA2P52926 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGA2P52926 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
HMGA2P52926 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HMGA2P52926 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGA2P52926 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
HMGA2P52926 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HMGA2P52926 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGA2P52926 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGA2P52926 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGA2P52926 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.35■□□□□ 0.21
HMGA2P52926 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.35■□□□□ 0.21
HMGA2P52926 GCSHP5-201ENST00000443090 522 ntBASIC16.35■□□□□ 0.21
HMGA2P52926 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.35■□□□□ 0.21
HMGA2P52926 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.35■□□□□ 0.21
HMGA2P52926 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HMGA2P52926 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
HMGA2P52926 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HMGA2P52926 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HMGA2P52926 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGA2P52926 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGA2P52926 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HMGA2P52926 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGA2P52926 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HMGA2P52926 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGA2P52926 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGA2P52926 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
HMGA2P52926 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGA2P52926 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HMGA2P52926 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
HMGA2P52926 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMGA2P52926 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HMGA2P52926 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMGA2P52926 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMGA2P52926 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.34■□□□□ 0.21
HMGA2P52926 AC098590.1-201ENST00000468126 897 ntBASIC16.34■□□□□ 0.21
HMGA2P52926 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms