Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLCNKAP51800 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.58■□□□□ 0.41
CLCNKAP51800 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
CLCNKAP51800 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.58■□□□□ 0.4
CLCNKAP51800 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLCNKAP51800 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLCNKAP51800 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLCNKAP51800 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLCNKAP51800 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.58■□□□□ 0.4
CLCNKAP51800 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CLCNKAP51800 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLCNKAP51800 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.58■□□□□ 0.4
CLCNKAP51800 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.58■□□□□ 0.4
CLCNKAP51800 MINOS1P3-201ENST00000457048 203 ntBASIC17.58■□□□□ 0.4
CLCNKAP51800 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLCNKAP51800 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.58■□□□□ 0.4
CLCNKAP51800 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.58■□□□□ 0.4
CLCNKAP51800 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.58■□□□□ 0.4
CLCNKAP51800 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.58■□□□□ 0.4
CLCNKAP51800 AC009533.2-201ENST00000543664 586 ntBASIC17.58■□□□□ 0.4
CLCNKAP51800 AC091304.2-201ENST00000564639 760 ntBASIC17.58■□□□□ 0.4
CLCNKAP51800 BNIP3P18-201ENST00000593976 575 ntBASIC17.58■□□□□ 0.4
CLCNKAP51800 AL138831.2-201ENST00000606564 490 ntBASIC17.58■□□□□ 0.4
CLCNKAP51800 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.58■□□□□ 0.4
CLCNKAP51800 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.58■□□□□ 0.4
CLCNKAP51800 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLCNKAP51800 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CLCNKAP51800 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLCNKAP51800 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLCNKAP51800 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLCNKAP51800 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLCNKAP51800 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLCNKAP51800 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CLCNKAP51800 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLCNKAP51800 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CLCNKAP51800 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCNKAP51800 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.57■□□□□ 0.4
CLCNKAP51800 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCNKAP51800 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.57■□□□□ 0.4
CLCNKAP51800 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCNKAP51800 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCNKAP51800 AC125634.1-201ENST00000438758 1403 ntBASIC17.57■□□□□ 0.4
CLCNKAP51800 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCNKAP51800 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CLCNKAP51800 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCNKAP51800 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCNKAP51800 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.57■□□□□ 0.4
CLCNKAP51800 AC022898.2-201ENST00000616822 1312 ntBASIC17.57■□□□□ 0.4
CLCNKAP51800 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCNKAP51800 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.57■□□□□ 0.4
CLCNKAP51800 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCNKAP51800 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCNKAP51800 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CLCNKAP51800 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCNKAP51800 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLCNKAP51800 TPM4P1-201ENST00000436100 807 ntBASIC17.57■□□□□ 0.4
CLCNKAP51800 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.57■□□□□ 0.4
CLCNKAP51800 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.57■□□□□ 0.4
CLCNKAP51800 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.57■□□□□ 0.4
CLCNKAP51800 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.57■□□□□ 0.4
CLCNKAP51800 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCNKAP51800 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCNKAP51800 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.57■□□□□ 0.4
CLCNKAP51800 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CLCNKAP51800 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CLCNKAP51800 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLCNKAP51800 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLCNKAP51800 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCNKAP51800 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
CLCNKAP51800 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLCNKAP51800 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCNKAP51800 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
CLCNKAP51800 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.57■□□□□ 0.4
CLCNKAP51800 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.57■□□□□ 0.4
CLCNKAP51800 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CLCNKAP51800 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCNKAP51800 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CLCNKAP51800 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCNKAP51800 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.57■□□□□ 0.4
CLCNKAP51800 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.56■□□□□ 0.4
CLCNKAP51800 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCNKAP51800 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLCNKAP51800 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCNKAP51800 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CLCNKAP51800 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.56■□□□□ 0.4
CLCNKAP51800 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCNKAP51800 AC097374.2-201ENST00000618617 1306 ntBASIC17.56■□□□□ 0.4
CLCNKAP51800 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CLCNKAP51800 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLCNKAP51800 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCNKAP51800 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.56■□□□□ 0.4
CLCNKAP51800 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCNKAP51800 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CLCNKAP51800 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.56■□□□□ 0.4
CLCNKAP51800 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCNKAP51800 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.56■□□□□ 0.4
CLCNKAP51800 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.56■□□□□ 0.4
CLCNKAP51800 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.56■□□□□ 0.4
CLCNKAP51800 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.56■□□□□ 0.4
CLCNKAP51800 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms