Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.66■□□□□ 0.74
CLCN3P51790 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.66■□□□□ 0.74
CLCN3P51790 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLCN3P51790 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
CLCN3P51790 AC090164.3-201ENST00000610780 2143 ntBASIC19.66■□□□□ 0.74
CLCN3P51790 AC020763.4-201ENST00000623414 4170 ntBASIC19.66■□□□□ 0.74
CLCN3P51790 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLCN3P51790 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLCN3P51790 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLCN3P51790 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLCN3P51790 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.66■□□□□ 0.74
CLCN3P51790 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLCN3P51790 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLCN3P51790 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.66■□□□□ 0.74
CLCN3P51790 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.66■□□□□ 0.74
CLCN3P51790 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.66■□□□□ 0.74
CLCN3P51790 RNPS1P1-201ENST00000507437 918 ntBASIC19.66■□□□□ 0.74
CLCN3P51790 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.66■□□□□ 0.74
CLCN3P51790 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.66■□□□□ 0.74
CLCN3P51790 AL049840.3-201ENST00000602669 611 ntBASIC19.66■□□□□ 0.74
CLCN3P51790 AC120114.3-201ENST00000611923 658 ntBASIC19.66■□□□□ 0.74
CLCN3P51790 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.66■□□□□ 0.74
CLCN3P51790 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.66■□□□□ 0.74
CLCN3P51790 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.66■□□□□ 0.74
CLCN3P51790 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CLCN3P51790 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLCN3P51790 AC009113.1-201ENST00000570267 2443 ntBASIC19.66■□□□□ 0.74
CLCN3P51790 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLCN3P51790 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CLCN3P51790 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLCN3P51790 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLCN3P51790 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLCN3P51790 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLCN3P51790 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CLCN3P51790 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCN3P51790 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLCN3P51790 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCN3P51790 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCN3P51790 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCN3P51790 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCN3P51790 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCN3P51790 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.65■□□□□ 0.74
CLCN3P51790 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCN3P51790 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCN3P51790 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.65■□□□□ 0.74
CLCN3P51790 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCN3P51790 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLCN3P51790 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.65■□□□□ 0.74
CLCN3P51790 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCN3P51790 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.65■□□□□ 0.74
CLCN3P51790 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLCN3P51790 AL590627.1-203ENST00000421194 1026 ntBASIC19.65■□□□□ 0.74
CLCN3P51790 AC073648.2-201ENST00000510116 352 ntBASIC19.65■□□□□ 0.74
CLCN3P51790 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLCN3P51790 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.65■□□□□ 0.74
CLCN3P51790 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
CLCN3P51790 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCN3P51790 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLCN3P51790 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.65■□□□□ 0.74
CLCN3P51790 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLCN3P51790 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCN3P51790 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.65■□□□□ 0.74
CLCN3P51790 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCN3P51790 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCN3P51790 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CLCN3P51790 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CLCN3P51790 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.65■□□□□ 0.74
CLCN3P51790 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCN3P51790 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.65■□□□□ 0.74
CLCN3P51790 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CLCN3P51790 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CLCN3P51790 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CLCN3P51790 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CLCN3P51790 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.64■□□□□ 0.73
CLCN3P51790 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLCN3P51790 HNRNPDP1-201ENST00000439535 754 ntBASIC19.64■□□□□ 0.73
CLCN3P51790 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.64■□□□□ 0.73
CLCN3P51790 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.64■□□□□ 0.73
CLCN3P51790 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.64■□□□□ 0.73
CLCN3P51790 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CLCN3P51790 MIR7706-201ENST00000613747 67 ntBASIC19.64■□□□□ 0.73
CLCN3P51790 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLCN3P51790 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CLCN3P51790 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.64■□□□□ 0.73
CLCN3P51790 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLCN3P51790 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.64■□□□□ 0.73
CLCN3P51790 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLCN3P51790 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CLCN3P51790 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CLCN3P51790 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLCN3P51790 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLCN3P51790 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCN3P51790 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CLCN3P51790 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.63■□□□□ 0.73
CLCN3P51790 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCN3P51790 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.63■□□□□ 0.73
CLCN3P51790 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCN3P51790 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCN3P51790 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCN3P51790 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms