Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC31.85■■■□□ 2.69
SMARCA4P51532 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC31.85■■■□□ 2.69
SMARCA4P51532 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
SMARCA4P51532 WBP2-203ENST00000433525 928 ntTSL 2 BASIC31.85■■■□□ 2.69
SMARCA4P51532 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
SMARCA4P51532 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC31.85■■■□□ 2.69
SMARCA4P51532 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC31.85■■■□□ 2.69
SMARCA4P51532 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
SMARCA4P51532 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
SMARCA4P51532 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
SMARCA4P51532 PTMS-202ENST00000389462 773 ntTSL 2 BASIC31.84■■■□□ 2.69
SMARCA4P51532 DUTP2-201ENST00000519164 463 ntBASIC31.84■■■□□ 2.69
SMARCA4P51532 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC31.84■■■□□ 2.69
SMARCA4P51532 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC31.84■■■□□ 2.69
SMARCA4P51532 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
SMARCA4P51532 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
SMARCA4P51532 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC31.84■■■□□ 2.69
SMARCA4P51532 AC009336.1-201ENST00000608941 1553 ntBASIC31.83■■■□□ 2.69
SMARCA4P51532 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC31.83■■■□□ 2.69
SMARCA4P51532 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC31.83■■■□□ 2.69
SMARCA4P51532 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC31.83■■■□□ 2.69
SMARCA4P51532 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC31.83■■■□□ 2.69
SMARCA4P51532 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC31.83■■■□□ 2.69
SMARCA4P51532 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC31.83■■■□□ 2.69
SMARCA4P51532 AL390955.2-201ENST00000603032 514 ntBASIC31.83■■■□□ 2.69
SMARCA4P51532 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC31.83■■■□□ 2.69
SMARCA4P51532 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
SMARCA4P51532 AC105339.1-204ENST00000636249 355 ntBASIC31.83■■■□□ 2.69
SMARCA4P51532 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC31.83■■■□□ 2.69
SMARCA4P51532 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
SMARCA4P51532 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC31.83■■■□□ 2.69
SMARCA4P51532 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
SMARCA4P51532 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC31.83■■■□□ 2.69
SMARCA4P51532 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
SMARCA4P51532 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
SMARCA4P51532 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
SMARCA4P51532 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC31.83■■■□□ 2.69
SMARCA4P51532 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC31.83■■■□□ 2.69
SMARCA4P51532 PTCHD3P3-201ENST00000403073 906 ntBASIC31.82■■■□□ 2.69
SMARCA4P51532 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC31.82■■■□□ 2.69
SMARCA4P51532 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC31.82■■■□□ 2.69
SMARCA4P51532 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC31.82■■■□□ 2.68
SMARCA4P51532 AC025580.3-201ENST00000617932 1424 ntBASIC31.82■■■□□ 2.68
SMARCA4P51532 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC31.82■■■□□ 2.68
SMARCA4P51532 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
SMARCA4P51532 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
SMARCA4P51532 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC31.82■■■□□ 2.68
SMARCA4P51532 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
SMARCA4P51532 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC31.82■■■□□ 2.68
SMARCA4P51532 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
SMARCA4P51532 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC31.82■■■□□ 2.68
SMARCA4P51532 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC31.82■■■□□ 2.68
SMARCA4P51532 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC31.82■■■□□ 2.68
SMARCA4P51532 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC31.82■■■□□ 2.68
SMARCA4P51532 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC31.82■■■□□ 2.68
SMARCA4P51532 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
SMARCA4P51532 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC31.81■■■□□ 2.68
SMARCA4P51532 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC31.81■■■□□ 2.68
SMARCA4P51532 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC31.81■■■□□ 2.68
SMARCA4P51532 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC31.81■■■□□ 2.68
SMARCA4P51532 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC31.8■■■□□ 2.68
SMARCA4P51532 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC31.8■■■□□ 2.68
SMARCA4P51532 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
SMARCA4P51532 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
SMARCA4P51532 IGHV3OR16-6-201ENST00000568775 360 ntBASIC31.8■■■□□ 2.68
SMARCA4P51532 CYB561-216ENST00000582297 897 ntTSL 3 BASIC31.8■■■□□ 2.68
SMARCA4P51532 GGTLC5P-201ENST00000617623 998 ntBASIC31.8■■■□□ 2.68
SMARCA4P51532 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC31.8■■■□□ 2.68
SMARCA4P51532 SP100-208ENST00000427101 1922 ntTSL 2 BASIC31.8■■■□□ 2.68
SMARCA4P51532 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
SMARCA4P51532 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
SMARCA4P51532 AC092919.2-201ENST00000623631 1645 ntBASIC31.8■■■□□ 2.68
SMARCA4P51532 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC31.8■■■□□ 2.68
SMARCA4P51532 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC31.79■■■□□ 2.68
SMARCA4P51532 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC31.79■■■□□ 2.68
SMARCA4P51532 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
SMARCA4P51532 AC074386.1-202ENST00000463561 864 ntBASIC31.79■■■□□ 2.68
SMARCA4P51532 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC31.79■■■□□ 2.68
SMARCA4P51532 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC31.79■■■□□ 2.68
SMARCA4P51532 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC31.79■■■□□ 2.68
SMARCA4P51532 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC31.79■■■□□ 2.68
SMARCA4P51532 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
SMARCA4P51532 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
SMARCA4P51532 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
SMARCA4P51532 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC31.79■■■□□ 2.68
SMARCA4P51532 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
SMARCA4P51532 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC31.79■■■□□ 2.68
SMARCA4P51532 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC31.79■■■□□ 2.68
SMARCA4P51532 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC31.78■■■□□ 2.68
SMARCA4P51532 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC31.78■■■□□ 2.68
SMARCA4P51532 AC093520.2-201ENST00000561830 333 ntBASIC31.78■■■□□ 2.68
SMARCA4P51532 AC015911.4-201ENST00000588022 1070 ntBASIC31.78■■■□□ 2.68
SMARCA4P51532 AC004835.2-201ENST00000603762 682 ntBASIC31.78■■■□□ 2.68
SMARCA4P51532 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC31.78■■■□□ 2.68
SMARCA4P51532 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC31.78■■■□□ 2.68
SMARCA4P51532 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
SMARCA4P51532 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC31.78■■■□□ 2.68
SMARCA4P51532 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
SMARCA4P51532 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
SMARCA4P51532 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC31.78■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms