Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UBE2AP49459 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UBE2AP49459 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UBE2AP49459 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC11.41□□□□□ -0.58
UBE2AP49459 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
UBE2AP49459 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC11.41□□□□□ -0.58
UBE2AP49459 GMCL1P1-201ENST00000463439 1581 ntBASIC11.41□□□□□ -0.58
UBE2AP49459 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC11.41□□□□□ -0.58
UBE2AP49459 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UBE2AP49459 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UBE2AP49459 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UBE2AP49459 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UBE2AP49459 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
UBE2AP49459 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2AP49459 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
UBE2AP49459 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC11.4□□□□□ -0.58
UBE2AP49459 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2AP49459 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC11.4□□□□□ -0.58
UBE2AP49459 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
UBE2AP49459 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC11.4□□□□□ -0.58
UBE2AP49459 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2AP49459 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2AP49459 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC11.4□□□□□ -0.58
UBE2AP49459 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2AP49459 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2AP49459 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
UBE2AP49459 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2AP49459 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC11.4□□□□□ -0.58
UBE2AP49459 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC11.4□□□□□ -0.58
UBE2AP49459 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
UBE2AP49459 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2AP49459 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC11.4□□□□□ -0.58
UBE2AP49459 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
UBE2AP49459 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2AP49459 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2AP49459 AL390955.1-201ENST00000428694 934 ntBASIC11.4□□□□□ -0.58
UBE2AP49459 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC11.4□□□□□ -0.58
UBE2AP49459 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC11.4□□□□□ -0.58
UBE2AP49459 KRT18P41-201ENST00000518924 1277 ntBASIC11.4□□□□□ -0.58
UBE2AP49459 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC11.4□□□□□ -0.58
UBE2AP49459 AP003041.3-201ENST00000527151 707 ntBASIC11.4□□□□□ -0.58
UBE2AP49459 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC11.4□□□□□ -0.58
UBE2AP49459 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2AP49459 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC11.4□□□□□ -0.58
UBE2AP49459 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC11.4□□□□□ -0.58
UBE2AP49459 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2AP49459 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
UBE2AP49459 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC11.4□□□□□ -0.58
UBE2AP49459 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2AP49459 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2AP49459 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2AP49459 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2AP49459 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2AP49459 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
UBE2AP49459 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2AP49459 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2AP49459 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
UBE2AP49459 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
UBE2AP49459 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
UBE2AP49459 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
UBE2AP49459 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
UBE2AP49459 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
UBE2AP49459 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
UBE2AP49459 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2AP49459 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
UBE2AP49459 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2AP49459 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2AP49459 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
UBE2AP49459 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC11.39□□□□□ -0.59
UBE2AP49459 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2AP49459 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2AP49459 NOC2LP2-201ENST00000407594 1944 ntBASIC11.39□□□□□ -0.59
UBE2AP49459 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC11.39□□□□□ -0.59
UBE2AP49459 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2AP49459 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2AP49459 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2AP49459 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2AP49459 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC11.39□□□□□ -0.59
UBE2AP49459 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2AP49459 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC11.39□□□□□ -0.59
UBE2AP49459 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
UBE2AP49459 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC11.39□□□□□ -0.59
UBE2AP49459 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC11.39□□□□□ -0.59
UBE2AP49459 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC11.39□□□□□ -0.59
UBE2AP49459 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC11.39□□□□□ -0.59
UBE2AP49459 GRAMD4P1-201ENST00000435181 1110 ntBASIC11.39□□□□□ -0.59
UBE2AP49459 PHB2-202ENST00000440277 996 ntTSL 5 BASIC11.39□□□□□ -0.59
UBE2AP49459 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC11.39□□□□□ -0.59
UBE2AP49459 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2AP49459 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2AP49459 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC11.39□□□□□ -0.59
UBE2AP49459 FITM1-202ENST00000559294 800 ntBASIC11.39□□□□□ -0.59
UBE2AP49459 NAPSB-206ENST00000562112 1266 ntBASIC11.39□□□□□ -0.59
UBE2AP49459 AL353719.1-201ENST00000566847 864 ntBASIC11.39□□□□□ -0.59
UBE2AP49459 AL512604.3-201ENST00000569583 964 ntBASIC11.39□□□□□ -0.59
UBE2AP49459 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC11.39□□□□□ -0.59
UBE2AP49459 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC11.39□□□□□ -0.59
UBE2AP49459 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2AP49459 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2AP49459 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms