Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT6CP48668 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.43■□□□□ 0.38
KRT6CP48668 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KRT6CP48668 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KRT6CP48668 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.43■□□□□ 0.38
KRT6CP48668 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.42■□□□□ 0.38
KRT6CP48668 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.42■□□□□ 0.38
KRT6CP48668 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT6CP48668 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
KRT6CP48668 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
KRT6CP48668 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.42■□□□□ 0.38
KRT6CP48668 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT6CP48668 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
KRT6CP48668 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT6CP48668 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.42■□□□□ 0.38
KRT6CP48668 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
KRT6CP48668 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT6CP48668 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT6CP48668 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT6CP48668 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KRT6CP48668 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
KRT6CP48668 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT6CP48668 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT6CP48668 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT6CP48668 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT6CP48668 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.42■□□□□ 0.38
KRT6CP48668 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.42■□□□□ 0.38
KRT6CP48668 AC034232.1-201ENST00000506026 1064 ntBASIC17.42■□□□□ 0.38
KRT6CP48668 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.42■□□□□ 0.38
KRT6CP48668 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
KRT6CP48668 AL157888.1-201ENST00000631930 593 ntBASIC17.42■□□□□ 0.38
KRT6CP48668 AC141257.4-201ENST00000634557 245 ntBASIC17.42■□□□□ 0.38
KRT6CP48668 AC136944.6-201ENST00000634818 245 ntBASIC17.42■□□□□ 0.38
KRT6CP48668 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
KRT6CP48668 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KRT6CP48668 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
KRT6CP48668 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT6CP48668 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
KRT6CP48668 AC132938.6-201ENST00000623828 1655 ntBASIC17.42■□□□□ 0.38
KRT6CP48668 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT6CP48668 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT6CP48668 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
KRT6CP48668 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT6CP48668 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
KRT6CP48668 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
KRT6CP48668 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT6CP48668 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT6CP48668 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KRT6CP48668 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT6CP48668 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
KRT6CP48668 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KRT6CP48668 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KRT6CP48668 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.41■□□□□ 0.38
KRT6CP48668 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KRT6CP48668 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.41■□□□□ 0.38
KRT6CP48668 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.41■□□□□ 0.38
KRT6CP48668 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.41■□□□□ 0.38
KRT6CP48668 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
KRT6CP48668 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KRT6CP48668 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KRT6CP48668 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT6CP48668 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KRT6CP48668 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.41■□□□□ 0.38
KRT6CP48668 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
KRT6CP48668 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
KRT6CP48668 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT6CP48668 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT6CP48668 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.41■□□□□ 0.38
KRT6CP48668 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT6CP48668 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT6CP48668 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
KRT6CP48668 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT6CP48668 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KRT6CP48668 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KRT6CP48668 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT6CP48668 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT6CP48668 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT6CP48668 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.4■□□□□ 0.38
KRT6CP48668 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT6CP48668 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT6CP48668 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT6CP48668 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.4■□□□□ 0.38
KRT6CP48668 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
KRT6CP48668 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.4■□□□□ 0.38
KRT6CP48668 AC145285.6-201ENST00000604632 637 ntBASIC17.4■□□□□ 0.38
KRT6CP48668 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
KRT6CP48668 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.4■□□□□ 0.38
KRT6CP48668 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
KRT6CP48668 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT6CP48668 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT6CP48668 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT6CP48668 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT6CP48668 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.4■□□□□ 0.38
KRT6CP48668 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT6CP48668 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT6CP48668 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT6CP48668 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT6CP48668 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT6CP48668 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KRT6CP48668 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms