Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PCP4P48539 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC12.3□□□□□ -0.44
PCP4P48539 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
PCP4P48539 FP475955.4-201ENST00000623131 1990 ntBASIC12.3□□□□□ -0.44
PCP4P48539 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
PCP4P48539 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
PCP4P48539 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC12.3□□□□□ -0.44
PCP4P48539 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
PCP4P48539 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PCP4P48539 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PCP4P48539 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PCP4P48539 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PCP4P48539 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PCP4P48539 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PCP4P48539 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
PCP4P48539 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PCP4P48539 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC12.29□□□□□ -0.44
PCP4P48539 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PCP4P48539 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
PCP4P48539 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PCP4P48539 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PCP4P48539 PHYHIP-201ENST00000321613 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PCP4P48539 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
PCP4P48539 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PCP4P48539 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
PCP4P48539 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.29□□□□□ -0.44
PCP4P48539 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PCP4P48539 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
PCP4P48539 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC12.29□□□□□ -0.44
PCP4P48539 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
PCP4P48539 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PCP4P48539 AC106818.1-201ENST00000623223 3242 ntBASIC12.29□□□□□ -0.44
PCP4P48539 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
PCP4P48539 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
PCP4P48539 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
PCP4P48539 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC12.29□□□□□ -0.44
PCP4P48539 AL691432.2-201ENST00000607222 2038 ntBASIC12.29□□□□□ -0.44
PCP4P48539 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.29□□□□□ -0.44
PCP4P48539 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.29□□□□□ -0.44
PCP4P48539 MVK-208ENST00000539696 608 ntTSL 5 BASIC12.29□□□□□ -0.44
PCP4P48539 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.29□□□□□ -0.44
PCP4P48539 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
PCP4P48539 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC12.29□□□□□ -0.44
PCP4P48539 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.29□□□□□ -0.44
PCP4P48539 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PCP4P48539 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC12.29□□□□□ -0.44
PCP4P48539 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
PCP4P48539 AC087741.3-201ENST00000624270 1347 ntBASIC12.29□□□□□ -0.44
PCP4P48539 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PCP4P48539 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PCP4P48539 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PCP4P48539 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC12.29□□□□□ -0.44
PCP4P48539 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
PCP4P48539 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PCP4P48539 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
PCP4P48539 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PCP4P48539 AL161938.1-201ENST00000569833 2180 ntBASIC12.29□□□□□ -0.44
PCP4P48539 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PCP4P48539 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PCP4P48539 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PCP4P48539 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PCP4P48539 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC12.29□□□□□ -0.44
PCP4P48539 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PCP4P48539 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC12.29□□□□□ -0.44
PCP4P48539 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
PCP4P48539 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
PCP4P48539 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PCP4P48539 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PCP4P48539 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
PCP4P48539 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PCP4P48539 VAX1-201ENST00000277905 4494 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PCP4P48539 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PCP4P48539 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
PCP4P48539 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PCP4P48539 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC12.28□□□□□ -0.44
PCP4P48539 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
PCP4P48539 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC12.28□□□□□ -0.44
PCP4P48539 DNAJB5-204ENST00000454002 2818 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PCP4P48539 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC12.28□□□□□ -0.44
PCP4P48539 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC12.28□□□□□ -0.44
PCP4P48539 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC12.28□□□□□ -0.44
PCP4P48539 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PCP4P48539 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.28□□□□□ -0.44
PCP4P48539 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PCP4P48539 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC12.28□□□□□ -0.44
PCP4P48539 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
PCP4P48539 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PCP4P48539 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PCP4P48539 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
PCP4P48539 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PCP4P48539 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PCP4P48539 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PCP4P48539 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC12.28□□□□□ -0.44
PCP4P48539 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
PCP4P48539 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
PCP4P48539 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
PCP4P48539 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC12.28□□□□□ -0.44
PCP4P48539 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PCP4P48539 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.28□□□□□ -0.44
PCP4P48539 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms