Protein–RNA interactions for Protein: P48163

ME1, NADP-dependent malic enzyme, humanhuman

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ME1P48163 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
ME1P48163 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ME1P48163 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC20.57■□□□□ 0.88
ME1P48163 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ME1P48163 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ME1P48163 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
ME1P48163 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
ME1P48163 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ME1P48163 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC20.56■□□□□ 0.88
ME1P48163 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ME1P48163 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ME1P48163 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
ME1P48163 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ME1P48163 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ME1P48163 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ME1P48163 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.56■□□□□ 0.88
ME1P48163 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ME1P48163 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ME1P48163 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ME1P48163 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ME1P48163 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.56■□□□□ 0.88
ME1P48163 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ME1P48163 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
ME1P48163 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.56■□□□□ 0.88
ME1P48163 NEK4P2-201ENST00000580004 1012 ntBASIC20.56■□□□□ 0.88
ME1P48163 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.56■□□□□ 0.88
ME1P48163 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
ME1P48163 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ME1P48163 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.56■□□□□ 0.88
ME1P48163 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.56■□□□□ 0.88
ME1P48163 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ME1P48163 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ME1P48163 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC20.56■□□□□ 0.88
ME1P48163 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ME1P48163 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.56■□□□□ 0.88
ME1P48163 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
ME1P48163 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ME1P48163 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ME1P48163 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ME1P48163 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.55■□□□□ 0.88
ME1P48163 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ME1P48163 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.55■□□□□ 0.88
ME1P48163 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ME1P48163 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
ME1P48163 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.55■□□□□ 0.88
ME1P48163 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.55■□□□□ 0.88
ME1P48163 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.55■□□□□ 0.88
ME1P48163 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.55■□□□□ 0.88
ME1P48163 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.55■□□□□ 0.88
ME1P48163 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.55■□□□□ 0.88
ME1P48163 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ME1P48163 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
ME1P48163 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
ME1P48163 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ME1P48163 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ME1P48163 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ME1P48163 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.55■□□□□ 0.88
ME1P48163 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
ME1P48163 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.55■□□□□ 0.88
ME1P48163 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ME1P48163 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
ME1P48163 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ME1P48163 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
ME1P48163 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ME1P48163 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
ME1P48163 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ME1P48163 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
ME1P48163 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.54■□□□□ 0.88
ME1P48163 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
ME1P48163 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
ME1P48163 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ME1P48163 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
ME1P48163 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ME1P48163 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ME1P48163 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
ME1P48163 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ME1P48163 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.54■□□□□ 0.88
ME1P48163 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.54■□□□□ 0.88
ME1P48163 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.54■□□□□ 0.88
ME1P48163 AC008687.5-201ENST00000593746 558 ntBASIC20.54■□□□□ 0.88
ME1P48163 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.54■□□□□ 0.88
ME1P48163 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.54■□□□□ 0.88
ME1P48163 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ME1P48163 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
ME1P48163 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.54■□□□□ 0.88
ME1P48163 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC20.54■□□□□ 0.88
ME1P48163 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
ME1P48163 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
ME1P48163 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.54■□□□□ 0.88
ME1P48163 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ME1P48163 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ME1P48163 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.54■□□□□ 0.88
ME1P48163 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
ME1P48163 LINC00602-201ENST00000629776 2065 ntBASIC20.54■□□□□ 0.88
ME1P48163 LINC00167-201ENST00000530583 1419 ntBASIC20.53■□□□□ 0.88
ME1P48163 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ME1P48163 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
ME1P48163 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.53■□□□□ 0.88
ME1P48163 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.53■□□□□ 0.88
ME1P48163 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms