Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMGCLP35914 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMGCLP35914 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HMGCLP35914 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
HMGCLP35914 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMGCLP35914 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMGCLP35914 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMGCLP35914 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HMGCLP35914 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMGCLP35914 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
HMGCLP35914 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMGCLP35914 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.85■□□□□ 0.45
HMGCLP35914 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.85■□□□□ 0.45
HMGCLP35914 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMGCLP35914 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.85■□□□□ 0.45
HMGCLP35914 UPK3BP1-201ENST00000428678 509 ntBASIC17.85■□□□□ 0.45
HMGCLP35914 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
HMGCLP35914 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMGCLP35914 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.85■□□□□ 0.45
HMGCLP35914 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.85■□□□□ 0.45
HMGCLP35914 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.85■□□□□ 0.45
HMGCLP35914 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HMGCLP35914 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
HMGCLP35914 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.85■□□□□ 0.45
HMGCLP35914 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.85■□□□□ 0.45
HMGCLP35914 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
HMGCLP35914 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.85■□□□□ 0.45
HMGCLP35914 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMGCLP35914 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.85■□□□□ 0.45
HMGCLP35914 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.85■□□□□ 0.45
HMGCLP35914 AC097374.2-201ENST00000618617 1306 ntBASIC17.85■□□□□ 0.45
HMGCLP35914 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.85■□□□□ 0.45
HMGCLP35914 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.85■□□□□ 0.45
HMGCLP35914 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
HMGCLP35914 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
HMGCLP35914 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMGCLP35914 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
HMGCLP35914 AC068880.1-201ENST00000507289 2297 ntBASIC17.84■□□□□ 0.45
HMGCLP35914 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.84■□□□□ 0.45
HMGCLP35914 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.84■□□□□ 0.45
HMGCLP35914 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
HMGCLP35914 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCLP35914 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCLP35914 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCLP35914 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCLP35914 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.84■□□□□ 0.45
HMGCLP35914 AL133373.2-201ENST00000623187 2828 ntBASIC17.84■□□□□ 0.45
HMGCLP35914 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.84■□□□□ 0.45
HMGCLP35914 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCLP35914 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCLP35914 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCLP35914 AC096633.1-201ENST00000422446 749 ntBASIC17.84■□□□□ 0.45
HMGCLP35914 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.84■□□□□ 0.45
HMGCLP35914 VENTXP7-201ENST00000475503 772 ntBASIC17.84■□□□□ 0.45
HMGCLP35914 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.84■□□□□ 0.45
HMGCLP35914 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.84■□□□□ 0.45
HMGCLP35914 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCLP35914 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCLP35914 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCLP35914 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.84■□□□□ 0.45
HMGCLP35914 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.84■□□□□ 0.45
HMGCLP35914 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.84■□□□□ 0.45
HMGCLP35914 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCLP35914 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
HMGCLP35914 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.84■□□□□ 0.45
HMGCLP35914 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.84■□□□□ 0.45
HMGCLP35914 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.84■□□□□ 0.45
HMGCLP35914 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.84■□□□□ 0.45
HMGCLP35914 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCLP35914 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCLP35914 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.84■□□□□ 0.45
HMGCLP35914 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCLP35914 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCLP35914 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCLP35914 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
HMGCLP35914 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCLP35914 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.84■□□□□ 0.45
HMGCLP35914 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
HMGCLP35914 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.84■□□□□ 0.45
HMGCLP35914 AC009949.1-201ENST00000623048 1830 ntBASIC17.84■□□□□ 0.45
HMGCLP35914 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
HMGCLP35914 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
HMGCLP35914 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
HMGCLP35914 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
HMGCLP35914 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
HMGCLP35914 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
HMGCLP35914 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HMGCLP35914 AC006116.8-202ENST00000587620 1550 ntBASIC17.83■□□□□ 0.45
HMGCLP35914 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
HMGCLP35914 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
HMGCLP35914 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
HMGCLP35914 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
HMGCLP35914 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.83■□□□□ 0.45
HMGCLP35914 AC233702.3-201ENST00000578656 1387 ntBASIC17.83■□□□□ 0.45
HMGCLP35914 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HMGCLP35914 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HMGCLP35914 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HMGCLP35914 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HMGCLP35914 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
HMGCLP35914 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms