Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRKCAP17252 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PRKCAP17252 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRKCAP17252 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PRKCAP17252 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRKCAP17252 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
PRKCAP17252 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PRKCAP17252 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PRKCAP17252 FAM210CP-201ENST00000445714 574 ntBASIC16.64■□□□□ 0.25
PRKCAP17252 HOMER2P1-201ENST00000455653 964 ntBASIC16.64■□□□□ 0.25
PRKCAP17252 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.64■□□□□ 0.25
PRKCAP17252 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.64■□□□□ 0.25
PRKCAP17252 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PRKCAP17252 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.64■□□□□ 0.25
PRKCAP17252 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRKCAP17252 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
PRKCAP17252 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PRKCAP17252 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PRKCAP17252 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRKCAP17252 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PRKCAP17252 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.64■□□□□ 0.25
PRKCAP17252 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.64■□□□□ 0.25
PRKCAP17252 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PRKCAP17252 AL162741.1-201ENST00000565563 1558 ntBASIC16.64■□□□□ 0.25
PRKCAP17252 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRKCAP17252 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRKCAP17252 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRKCAP17252 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRKCAP17252 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRKCAP17252 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PRKCAP17252 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRKCAP17252 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRKCAP17252 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PRKCAP17252 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.63■□□□□ 0.25
PRKCAP17252 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PRKCAP17252 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRKCAP17252 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRKCAP17252 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRKCAP17252 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.63■□□□□ 0.25
PRKCAP17252 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PRKCAP17252 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRKCAP17252 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PRKCAP17252 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRKCAP17252 PVRIG2P-201ENST00000435460 978 ntBASIC16.63■□□□□ 0.25
PRKCAP17252 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.63■□□□□ 0.25
PRKCAP17252 DUX4L26-201ENST00000489078 1255 ntBASIC16.63■□□□□ 0.25
PRKCAP17252 AC063952.2-201ENST00000498792 1227 ntBASIC16.63■□□□□ 0.25
PRKCAP17252 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
PRKCAP17252 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRKCAP17252 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRKCAP17252 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.63■□□□□ 0.25
PRKCAP17252 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRKCAP17252 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PRKCAP17252 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRKCAP17252 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.63■□□□□ 0.25
PRKCAP17252 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRKCAP17252 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRKCAP17252 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRKCAP17252 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.63■□□□□ 0.25
PRKCAP17252 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRKCAP17252 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PRKCAP17252 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PRKCAP17252 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.62■□□□□ 0.25
PRKCAP17252 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PRKCAP17252 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRKCAP17252 AL162727.3-201ENST00000635661 2787 ntBASIC16.62■□□□□ 0.25
PRKCAP17252 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.62■□□□□ 0.25
PRKCAP17252 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.62■□□□□ 0.25
PRKCAP17252 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.62■□□□□ 0.25
PRKCAP17252 ESPNP-201ENST00000270691 2015 ntBASIC16.62■□□□□ 0.25
PRKCAP17252 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PRKCAP17252 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PRKCAP17252 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.62■□□□□ 0.25
PRKCAP17252 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.62■□□□□ 0.25
PRKCAP17252 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRKCAP17252 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRKCAP17252 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PRKCAP17252 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PRKCAP17252 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PRKCAP17252 AC092647.4-201ENST00000457211 535 ntBASIC16.62■□□□□ 0.25
PRKCAP17252 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PRKCAP17252 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PRKCAP17252 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.62■□□□□ 0.25
PRKCAP17252 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.62■□□□□ 0.25
PRKCAP17252 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRKCAP17252 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.62■□□□□ 0.25
PRKCAP17252 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.62■□□□□ 0.25
PRKCAP17252 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.62■□□□□ 0.25
PRKCAP17252 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
PRKCAP17252 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
PRKCAP17252 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PRKCAP17252 CICP6-201ENST00000457191 2729 ntBASIC16.62■□□□□ 0.25
PRKCAP17252 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRKCAP17252 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.62■□□□□ 0.25
PRKCAP17252 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRKCAP17252 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRKCAP17252 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRKCAP17252 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRKCAP17252 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRKCAP17252 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms