Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
UBL4AP11441 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBL4AP11441 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBL4AP11441 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.62■□□□□ 0.25
UBL4AP11441 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
UBL4AP11441 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBL4AP11441 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
UBL4AP11441 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
UBL4AP11441 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBL4AP11441 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
UBL4AP11441 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBL4AP11441 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBL4AP11441 AC104076.2-201ENST00000448912 469 ntBASIC16.62■□□□□ 0.25
UBL4AP11441 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.62■□□□□ 0.25
UBL4AP11441 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBL4AP11441 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.62■□□□□ 0.25
UBL4AP11441 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
UBL4AP11441 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.62■□□□□ 0.25
UBL4AP11441 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
UBL4AP11441 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.62■□□□□ 0.25
UBL4AP11441 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBL4AP11441 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBL4AP11441 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
UBL4AP11441 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBL4AP11441 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
UBL4AP11441 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBL4AP11441 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBL4AP11441 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBL4AP11441 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBL4AP11441 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
UBL4AP11441 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBL4AP11441 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.62■□□□□ 0.25
UBL4AP11441 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.62■□□□□ 0.25
UBL4AP11441 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
UBL4AP11441 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.61■□□□□ 0.25
UBL4AP11441 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBL4AP11441 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBL4AP11441 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBL4AP11441 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBL4AP11441 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.61■□□□□ 0.25
UBL4AP11441 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBL4AP11441 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBL4AP11441 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBL4AP11441 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBL4AP11441 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBL4AP11441 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.61■□□□□ 0.25
UBL4AP11441 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.61■□□□□ 0.25
UBL4AP11441 KRT18P38-201ENST00000449496 1282 ntBASIC16.61■□□□□ 0.25
UBL4AP11441 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.61■□□□□ 0.25
UBL4AP11441 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.61■□□□□ 0.25
UBL4AP11441 LINC01238-205ENST00000567549 1107 ntBASIC16.61■□□□□ 0.25
UBL4AP11441 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.61■□□□□ 0.25
UBL4AP11441 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.61■□□□□ 0.25
UBL4AP11441 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.61■□□□□ 0.25
UBL4AP11441 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.61■□□□□ 0.25
UBL4AP11441 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBL4AP11441 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.61■□□□□ 0.25
UBL4AP11441 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBL4AP11441 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBL4AP11441 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.61■□□□□ 0.25
UBL4AP11441 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBL4AP11441 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBL4AP11441 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBL4AP11441 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.61■□□□□ 0.25
UBL4AP11441 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBL4AP11441 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBL4AP11441 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBL4AP11441 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBL4AP11441 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UBL4AP11441 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBL4AP11441 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBL4AP11441 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UBL4AP11441 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
UBL4AP11441 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.6■□□□□ 0.25
UBL4AP11441 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UBL4AP11441 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.6■□□□□ 0.25
UBL4AP11441 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBL4AP11441 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.6■□□□□ 0.25
UBL4AP11441 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBL4AP11441 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBL4AP11441 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UBL4AP11441 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBL4AP11441 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UBL4AP11441 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBL4AP11441 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
UBL4AP11441 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.6■□□□□ 0.25
UBL4AP11441 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.6■□□□□ 0.25
UBL4AP11441 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.6■□□□□ 0.25
UBL4AP11441 HLA-F-220ENST00000434407 884 ntBASIC16.6■□□□□ 0.25
UBL4AP11441 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBL4AP11441 AC092597.1-201ENST00000487352 616 ntBASIC16.6■□□□□ 0.25
UBL4AP11441 AC063952.2-201ENST00000498792 1227 ntBASIC16.6■□□□□ 0.25
UBL4AP11441 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.6■□□□□ 0.25
UBL4AP11441 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UBL4AP11441 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
UBL4AP11441 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBL4AP11441 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.6■□□□□ 0.25
UBL4AP11441 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.6■□□□□ 0.25
UBL4AP11441 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBL4AP11441 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms