Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RARBP10826 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
RARBP10826 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RARBP10826 PMPCAP1-201ENST00000508114 1576 ntBASIC20.04■□□□□ 0.8
RARBP10826 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RARBP10826 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.03■□□□□ 0.8
RARBP10826 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.03■□□□□ 0.8
RARBP10826 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RARBP10826 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.03■□□□□ 0.8
RARBP10826 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RARBP10826 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.03■□□□□ 0.8
RARBP10826 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RARBP10826 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.03■□□□□ 0.8
RARBP10826 KRT18P27-201ENST00000427733 1299 ntBASIC20.03■□□□□ 0.8
RARBP10826 DNAJB3-202ENST00000449667 1266 ntBASIC20.03■□□□□ 0.8
RARBP10826 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC20.03■□□□□ 0.8
RARBP10826 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RARBP10826 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC20.03■□□□□ 0.8
RARBP10826 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RARBP10826 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.03■□□□□ 0.8
RARBP10826 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RARBP10826 AC064836.3-201ENST00000607928 673 ntBASIC20.03■□□□□ 0.8
RARBP10826 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
RARBP10826 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RARBP10826 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RARBP10826 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RARBP10826 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RARBP10826 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RARBP10826 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RARBP10826 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
RARBP10826 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RARBP10826 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC20.02■□□□□ 0.8
RARBP10826 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
RARBP10826 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RARBP10826 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
RARBP10826 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
RARBP10826 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.02■□□□□ 0.8
RARBP10826 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.02■□□□□ 0.8
RARBP10826 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RARBP10826 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
RARBP10826 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RARBP10826 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
RARBP10826 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.02■□□□□ 0.8
RARBP10826 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RARBP10826 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.02■□□□□ 0.8
RARBP10826 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
RARBP10826 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
RARBP10826 AC211486.1-202ENST00000416371 468 ntBASIC20.02■□□□□ 0.8
RARBP10826 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.02■□□□□ 0.8
RARBP10826 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC20.02■□□□□ 0.8
RARBP10826 AC211476.1-201ENST00000503899 468 ntBASIC20.02■□□□□ 0.8
RARBP10826 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.02■□□□□ 0.8
RARBP10826 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.02■□□□□ 0.8
RARBP10826 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC20.02■□□□□ 0.8
RARBP10826 AC073592.4-201ENST00000623827 446 ntBASIC20.02■□□□□ 0.8
RARBP10826 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC20.02■□□□□ 0.8
RARBP10826 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.02■□□□□ 0.8
RARBP10826 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.02■□□□□ 0.8
RARBP10826 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RARBP10826 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RARBP10826 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RARBP10826 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
RARBP10826 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RARBP10826 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
RARBP10826 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
RARBP10826 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
RARBP10826 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.02■□□□□ 0.79
RARBP10826 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.02■□□□□ 0.79
RARBP10826 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RARBP10826 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.02■□□□□ 0.79
RARBP10826 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RARBP10826 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.01■□□□□ 0.79
RARBP10826 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RARBP10826 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RARBP10826 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.01■□□□□ 0.79
RARBP10826 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
RARBP10826 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RARBP10826 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RARBP10826 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.01■□□□□ 0.79
RARBP10826 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RARBP10826 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.01■□□□□ 0.79
RARBP10826 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RARBP10826 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
RARBP10826 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC20.01■□□□□ 0.79
RARBP10826 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RARBP10826 AC108751.1-201ENST00000490852 363 ntBASIC20.01■□□□□ 0.79
RARBP10826 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC20.01■□□□□ 0.79
RARBP10826 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC20.01■□□□□ 0.79
RARBP10826 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.01■□□□□ 0.79
RARBP10826 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
RARBP10826 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
RARBP10826 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RARBP10826 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RARBP10826 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.01■□□□□ 0.79
RARBP10826 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
RARBP10826 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RARBP10826 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RARBP10826 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RARBP10826 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RARBP10826 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms