Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
HMGN1P05114 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HMGN1P05114 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGN1P05114 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGN1P05114 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
HMGN1P05114 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGN1P05114 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGN1P05114 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGN1P05114 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGN1P05114 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGN1P05114 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.27■□□□□ 0.2
HMGN1P05114 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
HMGN1P05114 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HMGN1P05114 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
HMGN1P05114 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HMGN1P05114 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.27■□□□□ 0.2
HMGN1P05114 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HMGN1P05114 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
HMGN1P05114 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HMGN1P05114 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.27■□□□□ 0.19
HMGN1P05114 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HMGN1P05114 AL391005.1-201ENST00000623953 2435 ntBASIC16.27■□□□□ 0.19
HMGN1P05114 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HMGN1P05114 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HMGN1P05114 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.27■□□□□ 0.19
HMGN1P05114 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.27■□□□□ 0.19
HMGN1P05114 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.27■□□□□ 0.19
HMGN1P05114 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HMGN1P05114 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
HMGN1P05114 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGN1P05114 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.26■□□□□ 0.19
HMGN1P05114 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGN1P05114 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
HMGN1P05114 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGN1P05114 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
HMGN1P05114 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.26■□□□□ 0.19
HMGN1P05114 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGN1P05114 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGN1P05114 RPS2P55-201ENST00000397318 883 ntBASIC16.26■□□□□ 0.19
HMGN1P05114 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.26■□□□□ 0.19
HMGN1P05114 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HMGN1P05114 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGN1P05114 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.26■□□□□ 0.19
HMGN1P05114 AC107956.1-201ENST00000494359 873 ntBASIC16.26■□□□□ 0.19
HMGN1P05114 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HMGN1P05114 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.26■□□□□ 0.19
HMGN1P05114 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.26■□□□□ 0.19
HMGN1P05114 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.26■□□□□ 0.19
HMGN1P05114 MIR4651-201ENST00000582622 73 ntBASIC16.26■□□□□ 0.19
HMGN1P05114 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.26■□□□□ 0.19
HMGN1P05114 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.26■□□□□ 0.19
HMGN1P05114 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
HMGN1P05114 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.26■□□□□ 0.19
HMGN1P05114 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGN1P05114 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
HMGN1P05114 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HMGN1P05114 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HMGN1P05114 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGN1P05114 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
HMGN1P05114 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGN1P05114 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HMGN1P05114 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGN1P05114 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGN1P05114 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
HMGN1P05114 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HMGN1P05114 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
HMGN1P05114 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
HMGN1P05114 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
HMGN1P05114 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
HMGN1P05114 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGN1P05114 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGN1P05114 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.25■□□□□ 0.19
HMGN1P05114 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HMGN1P05114 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.25■□□□□ 0.19
HMGN1P05114 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGN1P05114 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HMGN1P05114 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HMGN1P05114 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGN1P05114 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGN1P05114 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGN1P05114 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HMGN1P05114 CCR12P-201ENST00000446203 998 ntBASIC16.25■□□□□ 0.19
HMGN1P05114 FAM201B-201ENST00000458407 597 ntBASIC16.25■□□□□ 0.19
HMGN1P05114 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.25■□□□□ 0.19
HMGN1P05114 BX088651.1-201ENST00000540551 451 ntBASIC16.25■□□□□ 0.19
HMGN1P05114 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.25■□□□□ 0.19
HMGN1P05114 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.25■□□□□ 0.19
HMGN1P05114 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.25■□□□□ 0.19
HMGN1P05114 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.25■□□□□ 0.19
HMGN1P05114 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
HMGN1P05114 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGN1P05114 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
HMGN1P05114 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HMGN1P05114 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGN1P05114 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.25■□□□□ 0.19
HMGN1P05114 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HMGN1P05114 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.25■□□□□ 0.19
HMGN1P05114 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HMGN1P05114 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGN1P05114 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms