Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HMGCRP04035 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
HMGCRP04035 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
HMGCRP04035 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HMGCRP04035 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HMGCRP04035 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
HMGCRP04035 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HMGCRP04035 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
HMGCRP04035 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HMGCRP04035 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC20.16■□□□□ 0.82
HMGCRP04035 MKNK2P1-201ENST00000437526 628 ntBASIC20.16■□□□□ 0.82
HMGCRP04035 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC20.16■□□□□ 0.82
HMGCRP04035 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC20.16■□□□□ 0.82
HMGCRP04035 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC20.16■□□□□ 0.82
HMGCRP04035 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.16■□□□□ 0.82
HMGCRP04035 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
HMGCRP04035 AL589182.2-201ENST00000619332 1049 ntBASIC20.16■□□□□ 0.82
HMGCRP04035 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
HMGCRP04035 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HMGCRP04035 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC20.16■□□□□ 0.82
HMGCRP04035 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HMGCRP04035 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.16■□□□□ 0.82
HMGCRP04035 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
HMGCRP04035 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HMGCRP04035 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HMGCRP04035 AL049812.1-201ENST00000432563 2267 ntBASIC20.15■□□□□ 0.82
HMGCRP04035 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HMGCRP04035 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HMGCRP04035 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
HMGCRP04035 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC20.15■□□□□ 0.82
HMGCRP04035 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC20.15■□□□□ 0.82
HMGCRP04035 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HMGCRP04035 SPDYE21P-201ENST00000413323 827 ntBASIC20.15■□□□□ 0.82
HMGCRP04035 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
HMGCRP04035 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC20.15■□□□□ 0.82
HMGCRP04035 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC20.15■□□□□ 0.82
HMGCRP04035 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
HMGCRP04035 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.15■□□□□ 0.82
HMGCRP04035 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.15■□□□□ 0.82
HMGCRP04035 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.15■□□□□ 0.82
HMGCRP04035 AD001527.2-201ENST00000622994 785 ntBASIC20.15■□□□□ 0.82
HMGCRP04035 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.15■□□□□ 0.82
HMGCRP04035 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
HMGCRP04035 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HMGCRP04035 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
HMGCRP04035 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.15■□□□□ 0.82
HMGCRP04035 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HMGCRP04035 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
HMGCRP04035 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
HMGCRP04035 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HMGCRP04035 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
HMGCRP04035 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
HMGCRP04035 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.14■□□□□ 0.82
HMGCRP04035 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
HMGCRP04035 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.14■□□□□ 0.81
HMGCRP04035 AC018445.3-201ENST00000624177 1945 ntBASIC20.14■□□□□ 0.81
HMGCRP04035 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HMGCRP04035 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.14■□□□□ 0.81
HMGCRP04035 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
HMGCRP04035 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC20.14■□□□□ 0.81
HMGCRP04035 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC20.14■□□□□ 0.81
HMGCRP04035 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HMGCRP04035 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HMGCRP04035 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HMGCRP04035 MIR770-201ENST00000390219 98 ntBASIC20.14■□□□□ 0.81
HMGCRP04035 SYS1-203ENST00000414310 795 ntTSL 3 BASIC20.14■□□□□ 0.81
HMGCRP04035 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC20.14■□□□□ 0.81
HMGCRP04035 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.14■□□□□ 0.81
HMGCRP04035 AC122714.2-201ENST00000502787 707 ntBASIC20.14■□□□□ 0.81
HMGCRP04035 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.14■□□□□ 0.81
HMGCRP04035 MIR4751-201ENST00000578027 74 ntBASIC20.14■□□□□ 0.81
HMGCRP04035 AL078644.1-201ENST00000609881 752 ntBASIC20.14■□□□□ 0.81
HMGCRP04035 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC20.14■□□□□ 0.81
HMGCRP04035 AC087289.5-201ENST00000586076 3175 ntBASIC20.14■□□□□ 0.81
HMGCRP04035 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HMGCRP04035 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
HMGCRP04035 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
HMGCRP04035 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HMGCRP04035 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HMGCRP04035 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
HMGCRP04035 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.14■□□□□ 0.81
HMGCRP04035 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HMGCRP04035 ELL2P1-201ENST00000413990 1906 ntBASIC20.14■□□□□ 0.81
HMGCRP04035 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.13■□□□□ 0.81
HMGCRP04035 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HMGCRP04035 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HMGCRP04035 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
HMGCRP04035 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HMGCRP04035 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HMGCRP04035 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HMGCRP04035 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
HMGCRP04035 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.13■□□□□ 0.81
HMGCRP04035 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.13■□□□□ 0.81
HMGCRP04035 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HMGCRP04035 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HMGCRP04035 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC20.13■□□□□ 0.81
HMGCRP04035 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HMGCRP04035 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HMGCRP04035 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC20.13■□□□□ 0.81
HMGCRP04035 AC011467.4-201ENST00000594891 528 ntBASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms