Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VTNP04004 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.61■□□□□ 0.73
VTNP04004 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
VTNP04004 AC022898.2-201ENST00000616822 1312 ntBASIC19.61■□□□□ 0.73
VTNP04004 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.61■□□□□ 0.73
VTNP04004 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
VTNP04004 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
VTNP04004 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
VTNP04004 SLC25A1P1-201ENST00000528351 927 ntBASIC19.61■□□□□ 0.73
VTNP04004 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.61■□□□□ 0.73
VTNP04004 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.61■□□□□ 0.73
VTNP04004 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.61■□□□□ 0.73
VTNP04004 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
VTNP04004 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.61■□□□□ 0.73
VTNP04004 FAM215A-202ENST00000632077 792 ntBASIC19.61■□□□□ 0.73
VTNP04004 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
VTNP04004 AC104581.1-202ENST00000635932 2618 ntBASIC19.61■□□□□ 0.73
VTNP04004 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.61■□□□□ 0.73
VTNP04004 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VTNP04004 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.61■□□□□ 0.73
VTNP04004 AL356309.3-201ENST00000624132 1934 ntBASIC19.61■□□□□ 0.73
VTNP04004 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.6■□□□□ 0.73
VTNP04004 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.6■□□□□ 0.73
VTNP04004 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VTNP04004 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VTNP04004 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VTNP04004 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.6■□□□□ 0.73
VTNP04004 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VTNP04004 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VTNP04004 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.6■□□□□ 0.73
VTNP04004 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
VTNP04004 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VTNP04004 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.6■□□□□ 0.73
VTNP04004 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
VTNP04004 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.6■□□□□ 0.73
VTNP04004 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.6■□□□□ 0.73
VTNP04004 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.6■□□□□ 0.73
VTNP04004 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.6■□□□□ 0.73
VTNP04004 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
VTNP04004 AF228730.7-201ENST00000641842 219 ntBASIC19.6■□□□□ 0.73
VTNP04004 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
VTNP04004 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.6■□□□□ 0.73
VTNP04004 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VTNP04004 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VTNP04004 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
VTNP04004 REXO1L9P-201ENST00000604264 2108 ntBASIC19.6■□□□□ 0.73
VTNP04004 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VTNP04004 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VTNP04004 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VTNP04004 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VTNP04004 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VTNP04004 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.59■□□□□ 0.73
VTNP04004 AC100803.2-201ENST00000562459 1963 ntBASIC19.59■□□□□ 0.73
VTNP04004 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
VTNP04004 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.59■□□□□ 0.73
VTNP04004 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.59■□□□□ 0.73
VTNP04004 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
VTNP04004 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
VTNP04004 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VTNP04004 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VTNP04004 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VTNP04004 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VTNP04004 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
VTNP04004 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
VTNP04004 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VTNP04004 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.59■□□□□ 0.73
VTNP04004 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
VTNP04004 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.59■□□□□ 0.73
VTNP04004 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
VTNP04004 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.59■□□□□ 0.73
VTNP04004 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
VTNP04004 RPS2P1-201ENST00000434010 821 ntBASIC19.59■□□□□ 0.73
VTNP04004 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.59■□□□□ 0.73
VTNP04004 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.59■□□□□ 0.73
VTNP04004 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.59■□□□□ 0.73
VTNP04004 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.59■□□□□ 0.73
VTNP04004 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.59■□□□□ 0.73
VTNP04004 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.59■□□□□ 0.73
VTNP04004 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
VTNP04004 AL671883.3-201ENST00000603274 991 ntBASIC19.59■□□□□ 0.73
VTNP04004 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VTNP04004 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.59■□□□□ 0.73
VTNP04004 AP000867.4-201ENST00000641616 219 ntBASIC19.59■□□□□ 0.73
VTNP04004 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.59■□□□□ 0.73
VTNP04004 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VTNP04004 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.59■□□□□ 0.73
VTNP04004 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VTNP04004 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VTNP04004 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VTNP04004 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
VTNP04004 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
VTNP04004 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.59■□□□□ 0.73
VTNP04004 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
VTNP04004 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
VTNP04004 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
VTNP04004 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
VTNP04004 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
VTNP04004 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.58■□□□□ 0.73
VTNP04004 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
VTNP04004 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms