Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TRIM3O75382 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM3O75382 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.76■□□□□ 0.27
TRIM3O75382 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.76■□□□□ 0.27
TRIM3O75382 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM3O75382 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TRIM3O75382 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM3O75382 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.75■□□□□ 0.27
TRIM3O75382 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM3O75382 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM3O75382 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TRIM3O75382 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TRIM3O75382 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM3O75382 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM3O75382 NFIC-211ENST00000641145 8399 ntBASIC16.75■□□□□ 0.27
TRIM3O75382 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM3O75382 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM3O75382 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM3O75382 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.75■□□□□ 0.27
TRIM3O75382 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.75■□□□□ 0.27
TRIM3O75382 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM3O75382 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.75■□□□□ 0.27
TRIM3O75382 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM3O75382 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM3O75382 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM3O75382 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.75■□□□□ 0.27
TRIM3O75382 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM3O75382 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.75■□□□□ 0.27
TRIM3O75382 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.75■□□□□ 0.27
TRIM3O75382 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM3O75382 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.75■□□□□ 0.27
TRIM3O75382 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM3O75382 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.75■□□□□ 0.27
TRIM3O75382 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM3O75382 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM3O75382 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TRIM3O75382 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM3O75382 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM3O75382 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM3O75382 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM3O75382 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM3O75382 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM3O75382 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM3O75382 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM3O75382 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM3O75382 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TRIM3O75382 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.74■□□□□ 0.27
TRIM3O75382 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM3O75382 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TRIM3O75382 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM3O75382 AC067852.2-201ENST00000590513 2313 ntBASIC16.74■□□□□ 0.27
TRIM3O75382 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM3O75382 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TRIM3O75382 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM3O75382 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.74■□□□□ 0.27
TRIM3O75382 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM3O75382 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM3O75382 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM3O75382 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
TRIM3O75382 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.74■□□□□ 0.27
TRIM3O75382 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM3O75382 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.74■□□□□ 0.27
TRIM3O75382 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM3O75382 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.74■□□□□ 0.27
TRIM3O75382 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.74■□□□□ 0.27
TRIM3O75382 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM3O75382 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM3O75382 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM3O75382 AC011498.5-201ENST00000592027 486 ntBASIC16.74■□□□□ 0.27
TRIM3O75382 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM3O75382 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM3O75382 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM3O75382 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM3O75382 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.74■□□□□ 0.27
TRIM3O75382 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM3O75382 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM3O75382 AC009102.3-201ENST00000623118 1491 ntBASIC16.73■□□□□ 0.27
TRIM3O75382 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM3O75382 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM3O75382 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
TRIM3O75382 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.73■□□□□ 0.27
TRIM3O75382 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM3O75382 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
TRIM3O75382 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
TRIM3O75382 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.73■□□□□ 0.27
TRIM3O75382 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM3O75382 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TRIM3O75382 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM3O75382 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.73■□□□□ 0.27
TRIM3O75382 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM3O75382 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.73■□□□□ 0.27
TRIM3O75382 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.73■□□□□ 0.27
TRIM3O75382 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.73■□□□□ 0.27
TRIM3O75382 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.73■□□□□ 0.27
TRIM3O75382 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.73■□□□□ 0.27
TRIM3O75382 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM3O75382 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
TRIM3O75382 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM3O75382 AC099398.1-201ENST00000567919 2776 ntBASIC16.73■□□□□ 0.27
TRIM3O75382 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms