Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.19■□□□□ 0.5
KDELR3O43731 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
KDELR3O43731 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.19■□□□□ 0.5
KDELR3O43731 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.19■□□□□ 0.5
KDELR3O43731 BNIP3P18-201ENST00000593976 575 ntBASIC18.19■□□□□ 0.5
KDELR3O43731 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KDELR3O43731 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KDELR3O43731 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
KDELR3O43731 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KDELR3O43731 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KDELR3O43731 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KDELR3O43731 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.19■□□□□ 0.5
KDELR3O43731 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
KDELR3O43731 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.19■□□□□ 0.5
KDELR3O43731 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KDELR3O43731 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
KDELR3O43731 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KDELR3O43731 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
KDELR3O43731 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
KDELR3O43731 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.19■□□□□ 0.5
KDELR3O43731 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KDELR3O43731 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
KDELR3O43731 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
KDELR3O43731 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
KDELR3O43731 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KDELR3O43731 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KDELR3O43731 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KDELR3O43731 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.18■□□□□ 0.5
KDELR3O43731 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KDELR3O43731 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.18■□□□□ 0.5
KDELR3O43731 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
KDELR3O43731 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.18■□□□□ 0.5
KDELR3O43731 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.18■□□□□ 0.5
KDELR3O43731 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KDELR3O43731 PRELID1P1-202ENST00000567272 903 ntBASIC18.18■□□□□ 0.5
KDELR3O43731 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.18■□□□□ 0.5
KDELR3O43731 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.18■□□□□ 0.5
KDELR3O43731 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KDELR3O43731 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KDELR3O43731 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.18■□□□□ 0.5
KDELR3O43731 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KDELR3O43731 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KDELR3O43731 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KDELR3O43731 NOC2LP1-202ENST00000452600 2235 ntBASIC18.18■□□□□ 0.5
KDELR3O43731 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.18■□□□□ 0.5
KDELR3O43731 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KDELR3O43731 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
KDELR3O43731 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.17■□□□□ 0.5
KDELR3O43731 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.17■□□□□ 0.5
KDELR3O43731 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
KDELR3O43731 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KDELR3O43731 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KDELR3O43731 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.17■□□□□ 0.5
KDELR3O43731 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KDELR3O43731 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
KDELR3O43731 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KDELR3O43731 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
KDELR3O43731 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.17■□□□□ 0.5
KDELR3O43731 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.17■□□□□ 0.5
KDELR3O43731 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
KDELR3O43731 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.17■□□□□ 0.5
KDELR3O43731 FOSL1P1-201ENST00000511041 816 ntBASIC18.17■□□□□ 0.5
KDELR3O43731 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.17■□□□□ 0.5
KDELR3O43731 AC012313.10-201ENST00000623509 926 ntBASIC18.17■□□□□ 0.5
KDELR3O43731 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
KDELR3O43731 TP73-AS1-210ENST00000637775 1455 ntBASIC18.17■□□□□ 0.5
KDELR3O43731 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KDELR3O43731 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
KDELR3O43731 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KDELR3O43731 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KDELR3O43731 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.17■□□□□ 0.5
KDELR3O43731 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
KDELR3O43731 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KDELR3O43731 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
KDELR3O43731 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
KDELR3O43731 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.17■□□□□ 0.5
KDELR3O43731 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KDELR3O43731 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.17■□□□□ 0.5
KDELR3O43731 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
KDELR3O43731 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
KDELR3O43731 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
KDELR3O43731 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
KDELR3O43731 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.16■□□□□ 0.5
KDELR3O43731 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KDELR3O43731 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
KDELR3O43731 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
KDELR3O43731 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.16■□□□□ 0.5
KDELR3O43731 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
KDELR3O43731 AC007967.3-201ENST00000434308 558 ntBASIC18.16■□□□□ 0.5
KDELR3O43731 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.16■□□□□ 0.5
KDELR3O43731 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.16■□□□□ 0.5
KDELR3O43731 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.16■□□□□ 0.5
KDELR3O43731 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.16■□□□□ 0.5
KDELR3O43731 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.16■□□□□ 0.5
KDELR3O43731 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KDELR3O43731 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.16■□□□□ 0.5
KDELR3O43731 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.16■□□□□ 0.5
KDELR3O43731 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.16■□□□□ 0.5
KDELR3O43731 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.16■□□□□ 0.5
KDELR3O43731 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms