Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RTCAO00442 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.14■□□□□ 0.33
RTCAO00442 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
RTCAO00442 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RTCAO00442 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.13■□□□□ 0.33
RTCAO00442 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.13■□□□□ 0.33
RTCAO00442 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTCAO00442 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTCAO00442 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RTCAO00442 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTCAO00442 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
RTCAO00442 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.13■□□□□ 0.33
RTCAO00442 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
RTCAO00442 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTCAO00442 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.13■□□□□ 0.33
RTCAO00442 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.13■□□□□ 0.33
RTCAO00442 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.13■□□□□ 0.33
RTCAO00442 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.13■□□□□ 0.33
RTCAO00442 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.13■□□□□ 0.33
RTCAO00442 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.13■□□□□ 0.33
RTCAO00442 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.13■□□□□ 0.33
RTCAO00442 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
RTCAO00442 GPR32P1-201ENST00000601788 811 ntBASIC17.13■□□□□ 0.33
RTCAO00442 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.13■□□□□ 0.33
RTCAO00442 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.13■□□□□ 0.33
RTCAO00442 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.13■□□□□ 0.33
RTCAO00442 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.13■□□□□ 0.33
RTCAO00442 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RTCAO00442 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RTCAO00442 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RTCAO00442 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.13■□□□□ 0.33
RTCAO00442 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RTCAO00442 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTCAO00442 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RTCAO00442 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTCAO00442 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
RTCAO00442 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTCAO00442 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTCAO00442 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTCAO00442 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTCAO00442 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
RTCAO00442 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTCAO00442 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTCAO00442 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTCAO00442 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RTCAO00442 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RTCAO00442 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTCAO00442 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTCAO00442 KRT18P55-202ENST00000578578 1546 ntBASIC17.12■□□□□ 0.33
RTCAO00442 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTCAO00442 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RTCAO00442 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTCAO00442 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTCAO00442 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTCAO00442 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTCAO00442 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTCAO00442 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTCAO00442 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTCAO00442 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTCAO00442 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.12■□□□□ 0.33
RTCAO00442 TSPY12P-201ENST00000421279 868 ntBASIC17.12■□□□□ 0.33
RTCAO00442 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.12■□□□□ 0.33
RTCAO00442 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.12■□□□□ 0.33
RTCAO00442 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.12■□□□□ 0.33
RTCAO00442 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.12■□□□□ 0.33
RTCAO00442 AL390719.2-201ENST00000606993 987 ntBASIC17.12■□□□□ 0.33
RTCAO00442 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.12■□□□□ 0.33
RTCAO00442 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RTCAO00442 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTCAO00442 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.12■□□□□ 0.33
RTCAO00442 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RTCAO00442 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTCAO00442 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RTCAO00442 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.12■□□□□ 0.33
RTCAO00442 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTCAO00442 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTCAO00442 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTCAO00442 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RTCAO00442 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTCAO00442 AC026471.1-201ENST00000564629 3026 ntBASIC17.12■□□□□ 0.33
RTCAO00442 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
RTCAO00442 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
RTCAO00442 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
RTCAO00442 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RTCAO00442 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RTCAO00442 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RTCAO00442 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTCAO00442 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RTCAO00442 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.12■□□□□ 0.33
RTCAO00442 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTCAO00442 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RTCAO00442 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTCAO00442 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTCAO00442 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RTCAO00442 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RTCAO00442 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTCAO00442 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.11■□□□□ 0.33
RTCAO00442 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTCAO00442 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTCAO00442 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms