Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
NACAE9PAV3 AL096828.2-201ENST00000567259 1965 ntBASIC13.15□□□□□ -0.31
NACAE9PAV3 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
NACAE9PAV3 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
NACAE9PAV3 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
NACAE9PAV3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
NACAE9PAV3 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NACAE9PAV3 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
NACAE9PAV3 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NACAE9PAV3 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NACAE9PAV3 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NACAE9PAV3 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NACAE9PAV3 AL023284.2-201ENST00000405850 579 ntBASIC13.14□□□□□ -0.31
NACAE9PAV3 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC13.14□□□□□ -0.31
NACAE9PAV3 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC13.14□□□□□ -0.31
NACAE9PAV3 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC13.14□□□□□ -0.31
NACAE9PAV3 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC13.14□□□□□ -0.31
NACAE9PAV3 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NACAE9PAV3 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC13.14□□□□□ -0.31
NACAE9PAV3 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC13.14□□□□□ -0.31
NACAE9PAV3 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC13.14□□□□□ -0.31
NACAE9PAV3 AC116407.4-201ENST00000623319 1061 ntBASIC13.14□□□□□ -0.31
NACAE9PAV3 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC13.14□□□□□ -0.31
NACAE9PAV3 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
NACAE9PAV3 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC13.14□□□□□ -0.31
NACAE9PAV3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NACAE9PAV3 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
NACAE9PAV3 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NACAE9PAV3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC13.14□□□□□ -0.31
NACAE9PAV3 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
NACAE9PAV3 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC13.14□□□□□ -0.31
NACAE9PAV3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
NACAE9PAV3 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NACAE9PAV3 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
NACAE9PAV3 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NACAE9PAV3 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
NACAE9PAV3 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NACAE9PAV3 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NACAE9PAV3 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NACAE9PAV3 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC13.14□□□□□ -0.31
NACAE9PAV3 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC13.14□□□□□ -0.31
NACAE9PAV3 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NACAE9PAV3 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NACAE9PAV3 ARMC10P1-201ENST00000313754 855 ntBASIC13.14□□□□□ -0.31
NACAE9PAV3 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC13.14□□□□□ -0.31
NACAE9PAV3 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC13.14□□□□□ -0.31
NACAE9PAV3 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NACAE9PAV3 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
NACAE9PAV3 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NACAE9PAV3 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NACAE9PAV3 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC13.14□□□□□ -0.31
NACAE9PAV3 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC13.13□□□□□ -0.31
NACAE9PAV3 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
NACAE9PAV3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NACAE9PAV3 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
NACAE9PAV3 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NACAE9PAV3 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NACAE9PAV3 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NACAE9PAV3 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
NACAE9PAV3 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NACAE9PAV3 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
NACAE9PAV3 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC13.13□□□□□ -0.31
NACAE9PAV3 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC13.13□□□□□ -0.31
NACAE9PAV3 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NACAE9PAV3 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC13.13□□□□□ -0.31
NACAE9PAV3 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NACAE9PAV3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC13.13□□□□□ -0.31
NACAE9PAV3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
NACAE9PAV3 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
NACAE9PAV3 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
NACAE9PAV3 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC13.13□□□□□ -0.31
NACAE9PAV3 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NACAE9PAV3 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NACAE9PAV3 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NACAE9PAV3 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NACAE9PAV3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC13.13□□□□□ -0.31
NACAE9PAV3 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC13.13□□□□□ -0.31
NACAE9PAV3 FAM87A-204ENST00000613235 858 ntBASIC13.13□□□□□ -0.31
NACAE9PAV3 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC13.13□□□□□ -0.31
NACAE9PAV3 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NACAE9PAV3 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
NACAE9PAV3 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
NACAE9PAV3 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NACAE9PAV3 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
NACAE9PAV3 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
NACAE9PAV3 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NACAE9PAV3 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC13.13□□□□□ -0.31
NACAE9PAV3 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
NACAE9PAV3 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC13.13□□□□□ -0.31
NACAE9PAV3 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
NACAE9PAV3 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NACAE9PAV3 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
NACAE9PAV3 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
NACAE9PAV3 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NACAE9PAV3 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NACAE9PAV3 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NACAE9PAV3 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
NACAE9PAV3 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NACAE9PAV3 AC009947.2-201ENST00000444014 672 ntBASIC13.12□□□□□ -0.31
NACAE9PAV3 CBFB-203ENST00000561924 584 ntTSL 5 BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms