Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01548A6NM66 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC01548A6NM66 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01548A6NM66 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
LINC01548A6NM66 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01548A6NM66 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
LINC01548A6NM66 AC138028.4-201ENST00000564984 1845 ntBASIC14.16□□□□□ -0.14
LINC01548A6NM66 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
LINC01548A6NM66 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01548A6NM66 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
LINC01548A6NM66 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01548A6NM66 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01548A6NM66 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC14.16□□□□□ -0.14
LINC01548A6NM66 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01548A6NM66 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01548A6NM66 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01548A6NM66 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC14.16□□□□□ -0.14
LINC01548A6NM66 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01548A6NM66 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC01548A6NM66 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01548A6NM66 KRT17P6-201ENST00000453795 1220 ntBASIC14.16□□□□□ -0.14
LINC01548A6NM66 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01548A6NM66 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.16□□□□□ -0.14
LINC01548A6NM66 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14.16□□□□□ -0.14
LINC01548A6NM66 DUTP2-201ENST00000519164 463 ntBASIC14.16□□□□□ -0.14
LINC01548A6NM66 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC14.16□□□□□ -0.14
LINC01548A6NM66 MIR3652-201ENST00000579335 131 ntBASIC14.16□□□□□ -0.14
LINC01548A6NM66 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC01548A6NM66 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
LINC01548A6NM66 AC005336.2-201ENST00000593183 939 ntBASIC14.16□□□□□ -0.14
LINC01548A6NM66 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01548A6NM66 AL353801.3-201ENST00000609898 542 ntBASIC14.16□□□□□ -0.14
LINC01548A6NM66 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC14.16□□□□□ -0.14
LINC01548A6NM66 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01548A6NM66 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
LINC01548A6NM66 CD276-203ENST00000537340 2439 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC01548A6NM66 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01548A6NM66 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC14.16□□□□□ -0.14
LINC01548A6NM66 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01548A6NM66 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
LINC01548A6NM66 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC01548A6NM66 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01548A6NM66 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LINC01548A6NM66 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC01548A6NM66 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01548A6NM66 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01548A6NM66 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01548A6NM66 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01548A6NM66 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01548A6NM66 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LINC01548A6NM66 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC14.15□□□□□ -0.14
LINC01548A6NM66 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
LINC01548A6NM66 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LINC01548A6NM66 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LINC01548A6NM66 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01548A6NM66 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01548A6NM66 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01548A6NM66 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01548A6NM66 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01548A6NM66 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01548A6NM66 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
LINC01548A6NM66 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01548A6NM66 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01548A6NM66 IGHV3-47-201ENST00000425060 335 ntBASIC14.15□□□□□ -0.14
LINC01548A6NM66 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.15□□□□□ -0.14
LINC01548A6NM66 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01548A6NM66 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.15□□□□□ -0.14
LINC01548A6NM66 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC01548A6NM66 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC01548A6NM66 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.15□□□□□ -0.14
LINC01548A6NM66 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC14.15□□□□□ -0.14
LINC01548A6NM66 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.15□□□□□ -0.14
LINC01548A6NM66 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01548A6NM66 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LINC01548A6NM66 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01548A6NM66 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LINC01548A6NM66 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01548A6NM66 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01548A6NM66 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LINC01548A6NM66 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01548A6NM66 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01548A6NM66 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
LINC01548A6NM66 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01548A6NM66 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01548A6NM66 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01548A6NM66 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC14.15□□□□□ -0.14
LINC01548A6NM66 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
LINC01548A6NM66 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC14.14□□□□□ -0.15
LINC01548A6NM66 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
LINC01548A6NM66 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01548A6NM66 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01548A6NM66 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
LINC01548A6NM66 AC005332.8-201ENST00000622750 2735 ntBASIC14.14□□□□□ -0.15
LINC01548A6NM66 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01548A6NM66 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01548A6NM66 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC14.14□□□□□ -0.15
LINC01548A6NM66 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01548A6NM66 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01548A6NM66 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
LINC01548A6NM66 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms