Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.07■□□□□ 0.16
TVP23AA6NH52 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TVP23AA6NH52 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TVP23AA6NH52 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
TVP23AA6NH52 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TVP23AA6NH52 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TVP23AA6NH52 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
TVP23AA6NH52 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TVP23AA6NH52 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TVP23AA6NH52 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
TVP23AA6NH52 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TVP23AA6NH52 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TVP23AA6NH52 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.06■□□□□ 0.16
TVP23AA6NH52 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.06■□□□□ 0.16
TVP23AA6NH52 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TVP23AA6NH52 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
TVP23AA6NH52 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TVP23AA6NH52 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TVP23AA6NH52 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TVP23AA6NH52 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
TVP23AA6NH52 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.06■□□□□ 0.16
TVP23AA6NH52 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TVP23AA6NH52 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.06■□□□□ 0.16
TVP23AA6NH52 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
TVP23AA6NH52 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TVP23AA6NH52 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
TVP23AA6NH52 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TVP23AA6NH52 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.06■□□□□ 0.16
TVP23AA6NH52 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TVP23AA6NH52 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.06■□□□□ 0.16
TVP23AA6NH52 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TVP23AA6NH52 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.05■□□□□ 0.16
TVP23AA6NH52 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TVP23AA6NH52 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.05■□□□□ 0.16
TVP23AA6NH52 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TVP23AA6NH52 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TVP23AA6NH52 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TVP23AA6NH52 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TVP23AA6NH52 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TVP23AA6NH52 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.05■□□□□ 0.16
TVP23AA6NH52 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TVP23AA6NH52 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
TVP23AA6NH52 MMP23A-201ENST00000234610 1017 ntBASIC16.05■□□□□ 0.16
TVP23AA6NH52 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TVP23AA6NH52 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TVP23AA6NH52 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TVP23AA6NH52 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.05■□□□□ 0.16
TVP23AA6NH52 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.05■□□□□ 0.16
TVP23AA6NH52 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.05■□□□□ 0.16
TVP23AA6NH52 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TVP23AA6NH52 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
TVP23AA6NH52 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.05■□□□□ 0.16
TVP23AA6NH52 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TVP23AA6NH52 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
TVP23AA6NH52 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TVP23AA6NH52 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TVP23AA6NH52 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TVP23AA6NH52 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TVP23AA6NH52 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TVP23AA6NH52 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TVP23AA6NH52 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TVP23AA6NH52 AC132938.6-201ENST00000623828 1655 ntBASIC16.05■□□□□ 0.16
TVP23AA6NH52 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
TVP23AA6NH52 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TVP23AA6NH52 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TVP23AA6NH52 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TVP23AA6NH52 AC139713.2-201ENST00000641328 2723 ntBASIC16.04■□□□□ 0.16
TVP23AA6NH52 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TVP23AA6NH52 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
TVP23AA6NH52 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TVP23AA6NH52 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TVP23AA6NH52 AC100803.2-201ENST00000562459 1963 ntBASIC16.04■□□□□ 0.16
TVP23AA6NH52 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TVP23AA6NH52 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TVP23AA6NH52 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TVP23AA6NH52 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TVP23AA6NH52 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TVP23AA6NH52 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TVP23AA6NH52 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TVP23AA6NH52 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TVP23AA6NH52 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TVP23AA6NH52 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.04■□□□□ 0.16
TVP23AA6NH52 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TVP23AA6NH52 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.04■□□□□ 0.16
TVP23AA6NH52 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.04■□□□□ 0.16
TVP23AA6NH52 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TVP23AA6NH52 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TVP23AA6NH52 FAM87A-204ENST00000613235 858 ntBASIC16.04■□□□□ 0.16
TVP23AA6NH52 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.04■□□□□ 0.16
TVP23AA6NH52 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TVP23AA6NH52 PP12613-201ENST00000424958 2230 ntBASIC16.04■□□□□ 0.16
TVP23AA6NH52 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TVP23AA6NH52 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.04■□□□□ 0.16
TVP23AA6NH52 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TVP23AA6NH52 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TVP23AA6NH52 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TVP23AA6NH52 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.04■□□□□ 0.16
TVP23AA6NH52 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TVP23AA6NH52 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TVP23AA6NH52 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms