Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRDV1A0A1B0GX56 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRDV1A0A1B0GX56 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TRDV1A0A1B0GX56 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRDV1A0A1B0GX56 HOXB1-202ENST00000577092 1414 ntBASIC15.8■□□□□ 0.12
TRDV1A0A1B0GX56 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRDV1A0A1B0GX56 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC15.8■□□□□ 0.12
TRDV1A0A1B0GX56 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRDV1A0A1B0GX56 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TRDV1A0A1B0GX56 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRDV1A0A1B0GX56 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRDV1A0A1B0GX56 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TRDV1A0A1B0GX56 BUB3-202ENST00000368859 667 ntTSL 3 BASIC15.8■□□□□ 0.12
TRDV1A0A1B0GX56 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRDV1A0A1B0GX56 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRDV1A0A1B0GX56 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC15.8■□□□□ 0.12
TRDV1A0A1B0GX56 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC15.8■□□□□ 0.12
TRDV1A0A1B0GX56 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC15.8■□□□□ 0.12
TRDV1A0A1B0GX56 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC15.8■□□□□ 0.12
TRDV1A0A1B0GX56 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC15.8■□□□□ 0.12
TRDV1A0A1B0GX56 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TRDV1A0A1B0GX56 AC069544.1-201ENST00000609399 999 ntBASIC15.8■□□□□ 0.12
TRDV1A0A1B0GX56 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TRDV1A0A1B0GX56 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRDV1A0A1B0GX56 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRDV1A0A1B0GX56 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRDV1A0A1B0GX56 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRDV1A0A1B0GX56 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRDV1A0A1B0GX56 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.8■□□□□ 0.12
TRDV1A0A1B0GX56 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRDV1A0A1B0GX56 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRDV1A0A1B0GX56 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRDV1A0A1B0GX56 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TRDV1A0A1B0GX56 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TRDV1A0A1B0GX56 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRDV1A0A1B0GX56 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.8■□□□□ 0.12
TRDV1A0A1B0GX56 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TRDV1A0A1B0GX56 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TRDV1A0A1B0GX56 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRDV1A0A1B0GX56 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRDV1A0A1B0GX56 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRDV1A0A1B0GX56 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRDV1A0A1B0GX56 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
TRDV1A0A1B0GX56 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
TRDV1A0A1B0GX56 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRDV1A0A1B0GX56 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRDV1A0A1B0GX56 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.79■□□□□ 0.12
TRDV1A0A1B0GX56 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.79■□□□□ 0.12
TRDV1A0A1B0GX56 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.79■□□□□ 0.12
TRDV1A0A1B0GX56 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRDV1A0A1B0GX56 AC022898.2-201ENST00000616822 1312 ntBASIC15.79■□□□□ 0.12
TRDV1A0A1B0GX56 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRDV1A0A1B0GX56 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TRDV1A0A1B0GX56 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRDV1A0A1B0GX56 AC239809.2-201ENST00000415381 517 ntBASIC15.79■□□□□ 0.12
TRDV1A0A1B0GX56 AP002982.1-201ENST00000492365 877 ntBASIC15.79■□□□□ 0.12
TRDV1A0A1B0GX56 PPP1R14BP3-201ENST00000509033 445 ntBASIC15.79■□□□□ 0.12
TRDV1A0A1B0GX56 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC15.79■□□□□ 0.12
TRDV1A0A1B0GX56 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC15.79■□□□□ 0.12
TRDV1A0A1B0GX56 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC15.79■□□□□ 0.12
TRDV1A0A1B0GX56 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC15.79■□□□□ 0.12
TRDV1A0A1B0GX56 AL023875.1-201ENST00000640777 796 ntBASIC15.79■□□□□ 0.12
TRDV1A0A1B0GX56 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRDV1A0A1B0GX56 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TRDV1A0A1B0GX56 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
TRDV1A0A1B0GX56 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.79■□□□□ 0.12
TRDV1A0A1B0GX56 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.79■□□□□ 0.12
TRDV1A0A1B0GX56 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.79■□□□□ 0.12
TRDV1A0A1B0GX56 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.79■□□□□ 0.12
TRDV1A0A1B0GX56 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TRDV1A0A1B0GX56 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TRDV1A0A1B0GX56 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRDV1A0A1B0GX56 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
TRDV1A0A1B0GX56 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRDV1A0A1B0GX56 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRDV1A0A1B0GX56 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRDV1A0A1B0GX56 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRDV1A0A1B0GX56 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRDV1A0A1B0GX56 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
TRDV1A0A1B0GX56 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRDV1A0A1B0GX56 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRDV1A0A1B0GX56 PCDH8P1-201ENST00000428983 2773 ntBASIC15.78■□□□□ 0.12
TRDV1A0A1B0GX56 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRDV1A0A1B0GX56 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRDV1A0A1B0GX56 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
TRDV1A0A1B0GX56 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRDV1A0A1B0GX56 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.78■□□□□ 0.12
TRDV1A0A1B0GX56 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRDV1A0A1B0GX56 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRDV1A0A1B0GX56 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRDV1A0A1B0GX56 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRDV1A0A1B0GX56 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRDV1A0A1B0GX56 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRDV1A0A1B0GX56 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRDV1A0A1B0GX56 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC15.78■□□□□ 0.12
TRDV1A0A1B0GX56 KRT17P3-201ENST00000420566 1262 ntBASIC15.78■□□□□ 0.12
TRDV1A0A1B0GX56 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRDV1A0A1B0GX56 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRDV1A0A1B0GX56 MIR5787-201ENST00000611784 55 ntBASIC15.78■□□□□ 0.12
TRDV1A0A1B0GX56 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms