Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
IGHV4-28A0A0C4DH34 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
IGHV4-28A0A0C4DH34 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
IGHV4-28A0A0C4DH34 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
IGHV4-28A0A0C4DH34 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
IGHV4-28A0A0C4DH34 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
IGHV4-28A0A0C4DH34 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
IGHV4-28A0A0C4DH34 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
IGHV4-28A0A0C4DH34 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
IGHV4-28A0A0C4DH34 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC12.96□□□□□ -0.33
IGHV4-28A0A0C4DH34 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
IGHV4-28A0A0C4DH34 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
IGHV4-28A0A0C4DH34 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
IGHV4-28A0A0C4DH34 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC12.96□□□□□ -0.33
IGHV4-28A0A0C4DH34 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
IGHV4-28A0A0C4DH34 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
IGHV4-28A0A0C4DH34 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC12.96□□□□□ -0.33
IGHV4-28A0A0C4DH34 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
IGHV4-28A0A0C4DH34 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
IGHV4-28A0A0C4DH34 MTCL1P1-201ENST00000446207 792 ntBASIC12.96□□□□□ -0.33
IGHV4-28A0A0C4DH34 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC12.96□□□□□ -0.33
IGHV4-28A0A0C4DH34 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC12.96□□□□□ -0.33
IGHV4-28A0A0C4DH34 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC12.96□□□□□ -0.33
IGHV4-28A0A0C4DH34 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
IGHV4-28A0A0C4DH34 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC12.96□□□□□ -0.33
IGHV4-28A0A0C4DH34 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC12.96□□□□□ -0.33
IGHV4-28A0A0C4DH34 AL121772.3-201ENST00000610840 674 ntBASIC12.96□□□□□ -0.33
IGHV4-28A0A0C4DH34 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
IGHV4-28A0A0C4DH34 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
IGHV4-28A0A0C4DH34 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
IGHV4-28A0A0C4DH34 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
IGHV4-28A0A0C4DH34 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
IGHV4-28A0A0C4DH34 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC12.96□□□□□ -0.34
IGHV4-28A0A0C4DH34 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
IGHV4-28A0A0C4DH34 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
IGHV4-28A0A0C4DH34 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC12.96□□□□□ -0.34
IGHV4-28A0A0C4DH34 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
IGHV4-28A0A0C4DH34 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
IGHV4-28A0A0C4DH34 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
IGHV4-28A0A0C4DH34 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
IGHV4-28A0A0C4DH34 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
IGHV4-28A0A0C4DH34 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
IGHV4-28A0A0C4DH34 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
IGHV4-28A0A0C4DH34 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
IGHV4-28A0A0C4DH34 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC12.96□□□□□ -0.34
IGHV4-28A0A0C4DH34 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
IGHV4-28A0A0C4DH34 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC12.96□□□□□ -0.34
IGHV4-28A0A0C4DH34 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 NUS1P2-201ENST00000417358 873 ntBASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 IGHV3-47-201ENST00000425060 335 ntBASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 AC111152.3-201ENST00000569699 673 ntBASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 IRF5-214ENST00000613821 595 ntTSL 5 BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms