Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CAPN6Q9Y6Q1 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CAPN6Q9Y6Q1 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.04■□□□□ 0.64
CAPN6Q9Y6Q1 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.03■□□□□ 0.64
CAPN6Q9Y6Q1 HLA-J-201ENST00000462773 1622 ntBASIC19.03■□□□□ 0.64
CAPN6Q9Y6Q1 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CAPN6Q9Y6Q1 AL121761.2-201ENST00000598007 1648 ntBASIC19.03■□□□□ 0.64
CAPN6Q9Y6Q1 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.03■□□□□ 0.64
CAPN6Q9Y6Q1 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CAPN6Q9Y6Q1 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.03■□□□□ 0.64
CAPN6Q9Y6Q1 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.03■□□□□ 0.64
CAPN6Q9Y6Q1 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CAPN6Q9Y6Q1 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CAPN6Q9Y6Q1 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
CAPN6Q9Y6Q1 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.03■□□□□ 0.64
CAPN6Q9Y6Q1 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
CAPN6Q9Y6Q1 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CAPN6Q9Y6Q1 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CAPN6Q9Y6Q1 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CAPN6Q9Y6Q1 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CAPN6Q9Y6Q1 KRT18P29-201ENST00000397031 1267 ntBASIC19.03■□□□□ 0.64
CAPN6Q9Y6Q1 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.03■□□□□ 0.64
CAPN6Q9Y6Q1 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CAPN6Q9Y6Q1 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.03■□□□□ 0.64
CAPN6Q9Y6Q1 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.03■□□□□ 0.64
CAPN6Q9Y6Q1 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CAPN6Q9Y6Q1 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.03■□□□□ 0.64
CAPN6Q9Y6Q1 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.03■□□□□ 0.64
CAPN6Q9Y6Q1 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CAPN6Q9Y6Q1 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CAPN6Q9Y6Q1 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CAPN6Q9Y6Q1 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CAPN6Q9Y6Q1 REXO1L11P-201ENST00000620964 1927 ntBASIC19.03■□□□□ 0.64
CAPN6Q9Y6Q1 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CAPN6Q9Y6Q1 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.03■□□□□ 0.64
CAPN6Q9Y6Q1 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CAPN6Q9Y6Q1 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CAPN6Q9Y6Q1 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CAPN6Q9Y6Q1 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CAPN6Q9Y6Q1 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CAPN6Q9Y6Q1 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.02■□□□□ 0.64
CAPN6Q9Y6Q1 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CAPN6Q9Y6Q1 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CAPN6Q9Y6Q1 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.02■□□□□ 0.64
CAPN6Q9Y6Q1 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CAPN6Q9Y6Q1 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CAPN6Q9Y6Q1 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CAPN6Q9Y6Q1 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CAPN6Q9Y6Q1 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.02■□□□□ 0.64
CAPN6Q9Y6Q1 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CAPN6Q9Y6Q1 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CAPN6Q9Y6Q1 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CAPN6Q9Y6Q1 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.02■□□□□ 0.64
CAPN6Q9Y6Q1 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.02■□□□□ 0.64
CAPN6Q9Y6Q1 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CAPN6Q9Y6Q1 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CAPN6Q9Y6Q1 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CAPN6Q9Y6Q1 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CAPN6Q9Y6Q1 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CAPN6Q9Y6Q1 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CAPN6Q9Y6Q1 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CAPN6Q9Y6Q1 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CAPN6Q9Y6Q1 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.01■□□□□ 0.63
CAPN6Q9Y6Q1 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CAPN6Q9Y6Q1 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CAPN6Q9Y6Q1 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CAPN6Q9Y6Q1 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.01■□□□□ 0.63
CAPN6Q9Y6Q1 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
CAPN6Q9Y6Q1 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.01■□□□□ 0.63
CAPN6Q9Y6Q1 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CAPN6Q9Y6Q1 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CAPN6Q9Y6Q1 AC007663.1-201ENST00000438948 1240 ntBASIC19.01■□□□□ 0.63
CAPN6Q9Y6Q1 RBM17P1-201ENST00000453646 1190 ntBASIC19.01■□□□□ 0.63
CAPN6Q9Y6Q1 FAM201B-201ENST00000458407 597 ntBASIC19.01■□□□□ 0.63
CAPN6Q9Y6Q1 SEC1P-202ENST00000473944 940 ntBASIC19.01■□□□□ 0.63
CAPN6Q9Y6Q1 AP003071.4-201ENST00000562276 1284 ntBASIC19.01■□□□□ 0.63
CAPN6Q9Y6Q1 AC142381.4-202ENST00000563973 229 ntBASIC19.01■□□□□ 0.63
CAPN6Q9Y6Q1 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CAPN6Q9Y6Q1 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.01■□□□□ 0.63
CAPN6Q9Y6Q1 AC009949.1-201ENST00000623048 1830 ntBASIC19.01■□□□□ 0.63
CAPN6Q9Y6Q1 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CAPN6Q9Y6Q1 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC19.01■□□□□ 0.63
CAPN6Q9Y6Q1 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CAPN6Q9Y6Q1 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CAPN6Q9Y6Q1 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CAPN6Q9Y6Q1 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.01■□□□□ 0.63
CAPN6Q9Y6Q1 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.01■□□□□ 0.63
CAPN6Q9Y6Q1 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19■□□□□ 0.63
CAPN6Q9Y6Q1 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19■□□□□ 0.63
CAPN6Q9Y6Q1 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CAPN6Q9Y6Q1 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CAPN6Q9Y6Q1 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19■□□□□ 0.63
CAPN6Q9Y6Q1 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CAPN6Q9Y6Q1 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CAPN6Q9Y6Q1 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CAPN6Q9Y6Q1 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CAPN6Q9Y6Q1 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19■□□□□ 0.63
CAPN6Q9Y6Q1 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CAPN6Q9Y6Q1 AL390955.1-201ENST00000428694 934 ntBASIC19■□□□□ 0.63
CAPN6Q9Y6Q1 TSPY20P-201ENST00000450910 630 ntBASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms