Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 WIZP1-201ENST00000531444 2299 ntBASIC17.78■□□□□ 0.44
SNX11Q9Y5W9 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.78■□□□□ 0.44
SNX11Q9Y5W9 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.78■□□□□ 0.44
SNX11Q9Y5W9 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SNX11Q9Y5W9 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SNX11Q9Y5W9 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNX11Q9Y5W9 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SNX11Q9Y5W9 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNX11Q9Y5W9 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
SNX11Q9Y5W9 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.77■□□□□ 0.44
SNX11Q9Y5W9 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNX11Q9Y5W9 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNX11Q9Y5W9 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNX11Q9Y5W9 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNX11Q9Y5W9 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.77■□□□□ 0.44
SNX11Q9Y5W9 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNX11Q9Y5W9 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SNX11Q9Y5W9 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNX11Q9Y5W9 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.77■□□□□ 0.44
SNX11Q9Y5W9 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.77■□□□□ 0.44
SNX11Q9Y5W9 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
SNX11Q9Y5W9 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.77■□□□□ 0.44
SNX11Q9Y5W9 AC011467.2-201ENST00000598425 242 ntBASIC17.77■□□□□ 0.44
SNX11Q9Y5W9 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.77■□□□□ 0.44
SNX11Q9Y5W9 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNX11Q9Y5W9 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNX11Q9Y5W9 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.77■□□□□ 0.44
SNX11Q9Y5W9 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SNX11Q9Y5W9 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SNX11Q9Y5W9 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SNX11Q9Y5W9 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SNX11Q9Y5W9 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.77■□□□□ 0.43
SNX11Q9Y5W9 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SNX11Q9Y5W9 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNX11Q9Y5W9 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNX11Q9Y5W9 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SNX11Q9Y5W9 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SNX11Q9Y5W9 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNX11Q9Y5W9 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.76■□□□□ 0.43
SNX11Q9Y5W9 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNX11Q9Y5W9 ANO7L1-203ENST00000602586 1720 ntBASIC17.76■□□□□ 0.43
SNX11Q9Y5W9 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
SNX11Q9Y5W9 AC125634.1-201ENST00000438758 1403 ntBASIC17.76■□□□□ 0.43
SNX11Q9Y5W9 AP005117.1-201ENST00000584346 1413 ntBASIC17.76■□□□□ 0.43
SNX11Q9Y5W9 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNX11Q9Y5W9 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNX11Q9Y5W9 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.76■□□□□ 0.43
SNX11Q9Y5W9 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.76■□□□□ 0.43
SNX11Q9Y5W9 AC021087.4-201ENST00000563761 564 ntBASIC17.76■□□□□ 0.43
SNX11Q9Y5W9 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SNX11Q9Y5W9 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.76■□□□□ 0.43
SNX11Q9Y5W9 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.76■□□□□ 0.43
SNX11Q9Y5W9 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.76■□□□□ 0.43
SNX11Q9Y5W9 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.76■□□□□ 0.43
SNX11Q9Y5W9 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNX11Q9Y5W9 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SNX11Q9Y5W9 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNX11Q9Y5W9 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SNX11Q9Y5W9 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.76■□□□□ 0.43
SNX11Q9Y5W9 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SNX11Q9Y5W9 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNX11Q9Y5W9 AC007613.1-201ENST00000572811 2597 ntBASIC17.76■□□□□ 0.43
SNX11Q9Y5W9 AC009113.1-201ENST00000570267 2443 ntBASIC17.76■□□□□ 0.43
SNX11Q9Y5W9 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SNX11Q9Y5W9 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNX11Q9Y5W9 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNX11Q9Y5W9 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNX11Q9Y5W9 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.75■□□□□ 0.43
SNX11Q9Y5W9 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SNX11Q9Y5W9 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SNX11Q9Y5W9 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.75■□□□□ 0.43
SNX11Q9Y5W9 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.75■□□□□ 0.43
SNX11Q9Y5W9 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNX11Q9Y5W9 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.75■□□□□ 0.43
SNX11Q9Y5W9 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SNX11Q9Y5W9 BX842568.4-201ENST00000421222 227 ntBASIC17.75■□□□□ 0.43
SNX11Q9Y5W9 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.75■□□□□ 0.43
SNX11Q9Y5W9 SART3-203ENST00000546611 1184 ntBASIC17.75■□□□□ 0.43
SNX11Q9Y5W9 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.75■□□□□ 0.43
SNX11Q9Y5W9 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNX11Q9Y5W9 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.75■□□□□ 0.43
SNX11Q9Y5W9 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNX11Q9Y5W9 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
SNX11Q9Y5W9 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.75■□□□□ 0.43
SNX11Q9Y5W9 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.75■□□□□ 0.43
SNX11Q9Y5W9 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNX11Q9Y5W9 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNX11Q9Y5W9 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.75■□□□□ 0.43
SNX11Q9Y5W9 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SNX11Q9Y5W9 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNX11Q9Y5W9 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNX11Q9Y5W9 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
SNX11Q9Y5W9 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SNX11Q9Y5W9 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.74■□□□□ 0.43
SNX11Q9Y5W9 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.74■□□□□ 0.43
SNX11Q9Y5W9 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNX11Q9Y5W9 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNX11Q9Y5W9 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.74■□□□□ 0.43
SNX11Q9Y5W9 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.74■□□□□ 0.43
SNX11Q9Y5W9 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms