Protein–RNA interactions for Protein: Q9UN30

SCML1, Sex comb on midleg-like protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML1Q9UN30 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
SCML1Q9UN30 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCML1Q9UN30 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.86■□□□□ 0.45
SCML1Q9UN30 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCML1Q9UN30 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCML1Q9UN30 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.86■□□□□ 0.45
SCML1Q9UN30 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCML1Q9UN30 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.86■□□□□ 0.45
SCML1Q9UN30 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.86■□□□□ 0.45
SCML1Q9UN30 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.86■□□□□ 0.45
SCML1Q9UN30 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.86■□□□□ 0.45
SCML1Q9UN30 MIR574-201ENST00000385209 96 ntBASIC17.86■□□□□ 0.45
SCML1Q9UN30 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SCML1Q9UN30 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.86■□□□□ 0.45
SCML1Q9UN30 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SCML1Q9UN30 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.86■□□□□ 0.45
SCML1Q9UN30 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCML1Q9UN30 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.86■□□□□ 0.45
SCML1Q9UN30 HNRNPDP1-201ENST00000439535 754 ntBASIC17.86■□□□□ 0.45
SCML1Q9UN30 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SCML1Q9UN30 KRT18P58-201ENST00000527480 1120 ntBASIC17.86■□□□□ 0.45
SCML1Q9UN30 OR7E14P-202ENST00000530490 1290 ntBASIC17.86■□□□□ 0.45
SCML1Q9UN30 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
SCML1Q9UN30 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.86■□□□□ 0.45
SCML1Q9UN30 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.86■□□□□ 0.45
SCML1Q9UN30 ZNF259P1-201ENST00000407656 1365 ntBASIC17.86■□□□□ 0.45
SCML1Q9UN30 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCML1Q9UN30 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCML1Q9UN30 HLA-J-201ENST00000462773 1622 ntBASIC17.86■□□□□ 0.45
SCML1Q9UN30 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCML1Q9UN30 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.86■□□□□ 0.45
SCML1Q9UN30 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
SCML1Q9UN30 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SCML1Q9UN30 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.86■□□□□ 0.45
SCML1Q9UN30 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCML1Q9UN30 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCML1Q9UN30 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCML1Q9UN30 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
SCML1Q9UN30 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.85■□□□□ 0.45
SCML1Q9UN30 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SCML1Q9UN30 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.85■□□□□ 0.45
SCML1Q9UN30 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.85■□□□□ 0.45
SCML1Q9UN30 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SCML1Q9UN30 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SCML1Q9UN30 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.85■□□□□ 0.45
SCML1Q9UN30 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.85■□□□□ 0.45
SCML1Q9UN30 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.85■□□□□ 0.45
SCML1Q9UN30 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.85■□□□□ 0.45
SCML1Q9UN30 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SCML1Q9UN30 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.85■□□□□ 0.45
SCML1Q9UN30 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCML1Q9UN30 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCML1Q9UN30 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
SCML1Q9UN30 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCML1Q9UN30 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCML1Q9UN30 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCML1Q9UN30 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SCML1Q9UN30 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.84■□□□□ 0.45
SCML1Q9UN30 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SCML1Q9UN30 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SCML1Q9UN30 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCML1Q9UN30 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.84■□□□□ 0.45
SCML1Q9UN30 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCML1Q9UN30 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SCML1Q9UN30 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SCML1Q9UN30 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SCML1Q9UN30 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.84■□□□□ 0.45
SCML1Q9UN30 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SCML1Q9UN30 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCML1Q9UN30 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.84■□□□□ 0.45
SCML1Q9UN30 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCML1Q9UN30 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.84■□□□□ 0.45
SCML1Q9UN30 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.84■□□□□ 0.45
SCML1Q9UN30 COX5BP2-201ENST00000392354 334 ntBASIC17.84■□□□□ 0.45
SCML1Q9UN30 RPL13AP23-201ENST00000480739 586 ntBASIC17.84■□□□□ 0.45
SCML1Q9UN30 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SCML1Q9UN30 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.84■□□□□ 0.45
SCML1Q9UN30 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.84■□□□□ 0.45
SCML1Q9UN30 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SCML1Q9UN30 NKAPP1-205ENST00000585790 367 ntBASIC17.84■□□□□ 0.45
SCML1Q9UN30 AL671883.3-201ENST00000603274 991 ntBASIC17.84■□□□□ 0.45
SCML1Q9UN30 AC116407.3-201ENST00000623905 1129 ntBASIC17.84■□□□□ 0.45
SCML1Q9UN30 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.84■□□□□ 0.45
SCML1Q9UN30 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.84■□□□□ 0.45
SCML1Q9UN30 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.84■□□□□ 0.45
SCML1Q9UN30 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCML1Q9UN30 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCML1Q9UN30 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SCML1Q9UN30 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SCML1Q9UN30 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.83■□□□□ 0.45
SCML1Q9UN30 AC079776.2-201ENST00000641154 1609 ntBASIC17.83■□□□□ 0.45
SCML1Q9UN30 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.45
SCML1Q9UN30 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
SCML1Q9UN30 PMPCAP1-201ENST00000508114 1576 ntBASIC17.83■□□□□ 0.45
SCML1Q9UN30 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SCML1Q9UN30 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SCML1Q9UN30 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SCML1Q9UN30 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SCML1Q9UN30 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SCML1Q9UN30 RPS2P1-201ENST00000434010 821 ntBASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms