Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.74■□□□□ 0.43
MKS1Q9NXB0 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MKS1Q9NXB0 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
MKS1Q9NXB0 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.74■□□□□ 0.43
MKS1Q9NXB0 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.74■□□□□ 0.43
MKS1Q9NXB0 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MKS1Q9NXB0 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
MKS1Q9NXB0 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
MKS1Q9NXB0 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.74■□□□□ 0.43
MKS1Q9NXB0 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
MKS1Q9NXB0 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MKS1Q9NXB0 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MKS1Q9NXB0 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MKS1Q9NXB0 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
MKS1Q9NXB0 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
MKS1Q9NXB0 AC090340.1-201ENST00000620778 4980 ntBASIC17.73■□□□□ 0.43
MKS1Q9NXB0 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
MKS1Q9NXB0 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MKS1Q9NXB0 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
MKS1Q9NXB0 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
MKS1Q9NXB0 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.73■□□□□ 0.43
MKS1Q9NXB0 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.73■□□□□ 0.43
MKS1Q9NXB0 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MKS1Q9NXB0 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.73■□□□□ 0.43
MKS1Q9NXB0 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
MKS1Q9NXB0 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MKS1Q9NXB0 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.73■□□□□ 0.43
MKS1Q9NXB0 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.73■□□□□ 0.43
MKS1Q9NXB0 AC113404.2-201ENST00000507884 177 ntBASIC17.73■□□□□ 0.43
MKS1Q9NXB0 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.73■□□□□ 0.43
MKS1Q9NXB0 CD99P1-205ENST00000527459 561 ntBASIC17.73■□□□□ 0.43
MKS1Q9NXB0 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MKS1Q9NXB0 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.73■□□□□ 0.43
MKS1Q9NXB0 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MKS1Q9NXB0 AL049637.2-201ENST00000641778 930 ntBASIC17.73■□□□□ 0.43
MKS1Q9NXB0 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MKS1Q9NXB0 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
MKS1Q9NXB0 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MKS1Q9NXB0 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MKS1Q9NXB0 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
MKS1Q9NXB0 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
MKS1Q9NXB0 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MKS1Q9NXB0 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.73■□□□□ 0.43
MKS1Q9NXB0 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MKS1Q9NXB0 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MKS1Q9NXB0 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
MKS1Q9NXB0 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.72■□□□□ 0.43
MKS1Q9NXB0 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MKS1Q9NXB0 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MKS1Q9NXB0 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MKS1Q9NXB0 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MKS1Q9NXB0 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.72■□□□□ 0.43
MKS1Q9NXB0 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
MKS1Q9NXB0 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
MKS1Q9NXB0 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MKS1Q9NXB0 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.72■□□□□ 0.43
MKS1Q9NXB0 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MKS1Q9NXB0 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MKS1Q9NXB0 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
MKS1Q9NXB0 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
MKS1Q9NXB0 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
MKS1Q9NXB0 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MKS1Q9NXB0 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.72■□□□□ 0.43
MKS1Q9NXB0 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MKS1Q9NXB0 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
MKS1Q9NXB0 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MKS1Q9NXB0 AC007663.1-201ENST00000438948 1240 ntBASIC17.72■□□□□ 0.43
MKS1Q9NXB0 AL355355.2-201ENST00000442321 338 ntBASIC17.72■□□□□ 0.43
MKS1Q9NXB0 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
MKS1Q9NXB0 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MKS1Q9NXB0 AC026471.5-201ENST00000615068 467 ntBASIC17.72■□□□□ 0.43
MKS1Q9NXB0 AC010653.2-201ENST00000623505 997 ntBASIC17.72■□□□□ 0.43
MKS1Q9NXB0 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.72■□□□□ 0.43
MKS1Q9NXB0 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MKS1Q9NXB0 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.72■□□□□ 0.43
MKS1Q9NXB0 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MKS1Q9NXB0 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
MKS1Q9NXB0 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
MKS1Q9NXB0 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MKS1Q9NXB0 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
MKS1Q9NXB0 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.72■□□□□ 0.43
MKS1Q9NXB0 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.72■□□□□ 0.43
MKS1Q9NXB0 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MKS1Q9NXB0 AC016396.2-201ENST00000562575 1417 ntBASIC17.72■□□□□ 0.43
MKS1Q9NXB0 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MKS1Q9NXB0 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.72■□□□□ 0.43
MKS1Q9NXB0 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MKS1Q9NXB0 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MKS1Q9NXB0 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
MKS1Q9NXB0 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MKS1Q9NXB0 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
MKS1Q9NXB0 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MKS1Q9NXB0 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
MKS1Q9NXB0 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
MKS1Q9NXB0 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
MKS1Q9NXB0 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.71■□□□□ 0.43
MKS1Q9NXB0 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.71■□□□□ 0.43
MKS1Q9NXB0 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.71■□□□□ 0.43
MKS1Q9NXB0 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.71■□□□□ 0.43
MKS1Q9NXB0 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms