Protein–RNA interactions for Protein: Q9HCH3

CPNE5, Copine-5, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE5Q9HCH3 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CPNE5Q9HCH3 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.37■□□□□ 0.37
CPNE5Q9HCH3 GPR32P1-201ENST00000601788 811 ntBASIC17.37■□□□□ 0.37
CPNE5Q9HCH3 AC010240.3-201ENST00000607688 395 ntBASIC17.37■□□□□ 0.37
CPNE5Q9HCH3 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CPNE5Q9HCH3 FEM1AP3-201ENST00000403722 1741 ntBASIC17.37■□□□□ 0.37
CPNE5Q9HCH3 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CPNE5Q9HCH3 AC243591.1-201ENST00000452967 1364 ntBASIC17.37■□□□□ 0.37
CPNE5Q9HCH3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CPNE5Q9HCH3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CPNE5Q9HCH3 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CPNE5Q9HCH3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CPNE5Q9HCH3 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CPNE5Q9HCH3 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CPNE5Q9HCH3 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CPNE5Q9HCH3 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CPNE5Q9HCH3 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CPNE5Q9HCH3 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPNE5Q9HCH3 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
CPNE5Q9HCH3 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPNE5Q9HCH3 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CPNE5Q9HCH3 AC099398.1-201ENST00000567919 2776 ntBASIC17.36■□□□□ 0.37
CPNE5Q9HCH3 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CPNE5Q9HCH3 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPNE5Q9HCH3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CPNE5Q9HCH3 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CPNE5Q9HCH3 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPNE5Q9HCH3 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CPNE5Q9HCH3 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPNE5Q9HCH3 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPNE5Q9HCH3 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPNE5Q9HCH3 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
CPNE5Q9HCH3 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.36■□□□□ 0.37
CPNE5Q9HCH3 MINOS1P3-201ENST00000457048 203 ntBASIC17.36■□□□□ 0.37
CPNE5Q9HCH3 VENTXP7-201ENST00000475503 772 ntBASIC17.36■□□□□ 0.37
CPNE5Q9HCH3 AC093909.1-201ENST00000504731 1122 ntBASIC17.36■□□□□ 0.37
CPNE5Q9HCH3 GUSBP12-201ENST00000513727 720 ntBASIC17.36■□□□□ 0.37
CPNE5Q9HCH3 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.36■□□□□ 0.37
CPNE5Q9HCH3 AC009065.1-201ENST00000564055 1225 ntBASIC17.36■□□□□ 0.37
CPNE5Q9HCH3 AP005901.3-202ENST00000581653 237 ntBASIC17.36■□□□□ 0.37
CPNE5Q9HCH3 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.36■□□□□ 0.37
CPNE5Q9HCH3 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.36■□□□□ 0.37
CPNE5Q9HCH3 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPNE5Q9HCH3 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.36■□□□□ 0.37
CPNE5Q9HCH3 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPNE5Q9HCH3 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CPNE5Q9HCH3 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CPNE5Q9HCH3 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CPNE5Q9HCH3 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPNE5Q9HCH3 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.35■□□□□ 0.37
CPNE5Q9HCH3 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE5Q9HCH3 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.35■□□□□ 0.37
CPNE5Q9HCH3 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE5Q9HCH3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.35■□□□□ 0.37
CPNE5Q9HCH3 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE5Q9HCH3 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE5Q9HCH3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE5Q9HCH3 FP475955.4-201ENST00000623131 1990 ntBASIC17.35■□□□□ 0.37
CPNE5Q9HCH3 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE5Q9HCH3 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE5Q9HCH3 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE5Q9HCH3 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
CPNE5Q9HCH3 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.35■□□□□ 0.37
CPNE5Q9HCH3 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE5Q9HCH3 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
CPNE5Q9HCH3 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE5Q9HCH3 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.35■□□□□ 0.37
CPNE5Q9HCH3 HMGN1P19-201ENST00000436976 333 ntBASIC17.35■□□□□ 0.37
CPNE5Q9HCH3 AC091607.1-201ENST00000490318 1060 ntBASIC17.35■□□□□ 0.37
CPNE5Q9HCH3 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE5Q9HCH3 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.35■□□□□ 0.37
CPNE5Q9HCH3 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.35■□□□□ 0.37
CPNE5Q9HCH3 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.35■□□□□ 0.37
CPNE5Q9HCH3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CPNE5Q9HCH3 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.35■□□□□ 0.37
CPNE5Q9HCH3 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE5Q9HCH3 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE5Q9HCH3 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE5Q9HCH3 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE5Q9HCH3 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
CPNE5Q9HCH3 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.35■□□□□ 0.37
CPNE5Q9HCH3 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.35■□□□□ 0.37
CPNE5Q9HCH3 IRX1P1-201ENST00000438849 1838 ntBASIC17.35■□□□□ 0.37
CPNE5Q9HCH3 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.35■□□□□ 0.37
CPNE5Q9HCH3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CPNE5Q9HCH3 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE5Q9HCH3 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE5Q9HCH3 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE5Q9HCH3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE5Q9HCH3 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE5Q9HCH3 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CPNE5Q9HCH3 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE5Q9HCH3 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE5Q9HCH3 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CPNE5Q9HCH3 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CPNE5Q9HCH3 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CPNE5Q9HCH3 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CPNE5Q9HCH3 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CPNE5Q9HCH3 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CPNE5Q9HCH3 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms