Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.95■□□□□ 0.78
ATP6V0A4Q9HBG4 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.95■□□□□ 0.78
ATP6V0A4Q9HBG4 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.95■□□□□ 0.78
ATP6V0A4Q9HBG4 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.95■□□□□ 0.78
ATP6V0A4Q9HBG4 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ATP6V0A4Q9HBG4 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ATP6V0A4Q9HBG4 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.95■□□□□ 0.78
ATP6V0A4Q9HBG4 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
ATP6V0A4Q9HBG4 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.95■□□□□ 0.78
ATP6V0A4Q9HBG4 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATP6V0A4Q9HBG4 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATP6V0A4Q9HBG4 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.95■□□□□ 0.78
ATP6V0A4Q9HBG4 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATP6V0A4Q9HBG4 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ATP6V0A4Q9HBG4 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
ATP6V0A4Q9HBG4 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.94■□□□□ 0.78
ATP6V0A4Q9HBG4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATP6V0A4Q9HBG4 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ATP6V0A4Q9HBG4 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATP6V0A4Q9HBG4 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ATP6V0A4Q9HBG4 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
ATP6V0A4Q9HBG4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.94■□□□□ 0.78
ATP6V0A4Q9HBG4 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATP6V0A4Q9HBG4 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATP6V0A4Q9HBG4 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATP6V0A4Q9HBG4 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATP6V0A4Q9HBG4 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
ATP6V0A4Q9HBG4 IGHV3-47-201ENST00000425060 335 ntBASIC19.94■□□□□ 0.78
ATP6V0A4Q9HBG4 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.94■□□□□ 0.78
ATP6V0A4Q9HBG4 AC112698.1-201ENST00000510299 916 ntBASIC19.94■□□□□ 0.78
ATP6V0A4Q9HBG4 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ATP6V0A4Q9HBG4 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ATP6V0A4Q9HBG4 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.94■□□□□ 0.78
ATP6V0A4Q9HBG4 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.94■□□□□ 0.78
ATP6V0A4Q9HBG4 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
ATP6V0A4Q9HBG4 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
ATP6V0A4Q9HBG4 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.94■□□□□ 0.78
ATP6V0A4Q9HBG4 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATP6V0A4Q9HBG4 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.94■□□□□ 0.78
ATP6V0A4Q9HBG4 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.94■□□□□ 0.78
ATP6V0A4Q9HBG4 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATP6V0A4Q9HBG4 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
ATP6V0A4Q9HBG4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ATP6V0A4Q9HBG4 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATP6V0A4Q9HBG4 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.94■□□□□ 0.78
ATP6V0A4Q9HBG4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATP6V0A4Q9HBG4 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.93■□□□□ 0.78
ATP6V0A4Q9HBG4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.93■□□□□ 0.78
ATP6V0A4Q9HBG4 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.93■□□□□ 0.78
ATP6V0A4Q9HBG4 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP6V0A4Q9HBG4 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP6V0A4Q9HBG4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
ATP6V0A4Q9HBG4 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP6V0A4Q9HBG4 NSUN5P1-202ENST00000421140 1535 ntBASIC19.93■□□□□ 0.78
ATP6V0A4Q9HBG4 NSUN5P2-203ENST00000457352 1529 ntBASIC19.93■□□□□ 0.78
ATP6V0A4Q9HBG4 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP6V0A4Q9HBG4 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP6V0A4Q9HBG4 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
ATP6V0A4Q9HBG4 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP6V0A4Q9HBG4 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
ATP6V0A4Q9HBG4 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ATP6V0A4Q9HBG4 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
ATP6V0A4Q9HBG4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP6V0A4Q9HBG4 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
ATP6V0A4Q9HBG4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.93■□□□□ 0.78
ATP6V0A4Q9HBG4 AC009078.2-202ENST00000463353 338 ntBASIC19.93■□□□□ 0.78
ATP6V0A4Q9HBG4 DUTP2-201ENST00000519164 463 ntBASIC19.93■□□□□ 0.78
ATP6V0A4Q9HBG4 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.93■□□□□ 0.78
ATP6V0A4Q9HBG4 AL160237.2-201ENST00000556165 472 ntBASIC19.93■□□□□ 0.78
ATP6V0A4Q9HBG4 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.93■□□□□ 0.78
ATP6V0A4Q9HBG4 AC104692.2-201ENST00000603054 253 ntBASIC19.93■□□□□ 0.78
ATP6V0A4Q9HBG4 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.93■□□□□ 0.78
ATP6V0A4Q9HBG4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ATP6V0A4Q9HBG4 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
ATP6V0A4Q9HBG4 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP6V0A4Q9HBG4 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP6V0A4Q9HBG4 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP6V0A4Q9HBG4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP6V0A4Q9HBG4 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.93■□□□□ 0.78
ATP6V0A4Q9HBG4 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP6V0A4Q9HBG4 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP6V0A4Q9HBG4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.92■□□□□ 0.78
ATP6V0A4Q9HBG4 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP6V0A4Q9HBG4 AC020763.4-201ENST00000623414 4170 ntBASIC19.92■□□□□ 0.78
ATP6V0A4Q9HBG4 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP6V0A4Q9HBG4 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP6V0A4Q9HBG4 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP6V0A4Q9HBG4 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ATP6V0A4Q9HBG4 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP6V0A4Q9HBG4 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ATP6V0A4Q9HBG4 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ATP6V0A4Q9HBG4 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP6V0A4Q9HBG4 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP6V0A4Q9HBG4 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.92■□□□□ 0.78
ATP6V0A4Q9HBG4 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ATP6V0A4Q9HBG4 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.92■□□□□ 0.78
ATP6V0A4Q9HBG4 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ATP6V0A4Q9HBG4 AC079781.3-201ENST00000449110 356 ntBASIC19.92■□□□□ 0.78
ATP6V0A4Q9HBG4 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
ATP6V0A4Q9HBG4 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms