Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 AP005117.1-201ENST00000584346 1413 ntBASIC20.9■□□□□ 0.94
SH2D4AQ9H788 AC022898.2-201ENST00000616822 1312 ntBASIC20.9■□□□□ 0.94
SH2D4AQ9H788 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SH2D4AQ9H788 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SH2D4AQ9H788 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SH2D4AQ9H788 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SH2D4AQ9H788 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SH2D4AQ9H788 AC018712.1-201ENST00000455767 687 ntBASIC20.9■□□□□ 0.94
SH2D4AQ9H788 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.9■□□□□ 0.94
SH2D4AQ9H788 RNA5SP419-201ENST00000515908 135 ntBASIC20.9■□□□□ 0.94
SH2D4AQ9H788 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.9■□□□□ 0.94
SH2D4AQ9H788 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SH2D4AQ9H788 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SH2D4AQ9H788 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
SH2D4AQ9H788 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.9■□□□□ 0.94
SH2D4AQ9H788 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.9■□□□□ 0.94
SH2D4AQ9H788 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SH2D4AQ9H788 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.9■□□□□ 0.94
SH2D4AQ9H788 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SH2D4AQ9H788 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
SH2D4AQ9H788 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
SH2D4AQ9H788 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.89■□□□□ 0.94
SH2D4AQ9H788 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.89■□□□□ 0.94
SH2D4AQ9H788 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SH2D4AQ9H788 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.89■□□□□ 0.94
SH2D4AQ9H788 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SH2D4AQ9H788 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SH2D4AQ9H788 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.89■□□□□ 0.93
SH2D4AQ9H788 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SH2D4AQ9H788 RPS2P28-201ENST00000314255 741 ntBASIC20.89■□□□□ 0.93
SH2D4AQ9H788 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SH2D4AQ9H788 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.89■□□□□ 0.93
SH2D4AQ9H788 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SH2D4AQ9H788 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.89■□□□□ 0.93
SH2D4AQ9H788 RNPS1P1-201ENST00000507437 918 ntBASIC20.89■□□□□ 0.93
SH2D4AQ9H788 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.89■□□□□ 0.93
SH2D4AQ9H788 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
SH2D4AQ9H788 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.89■□□□□ 0.93
SH2D4AQ9H788 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.89■□□□□ 0.93
SH2D4AQ9H788 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.89■□□□□ 0.93
SH2D4AQ9H788 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.89■□□□□ 0.93
SH2D4AQ9H788 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SH2D4AQ9H788 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SH2D4AQ9H788 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.89■□□□□ 0.93
SH2D4AQ9H788 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.89■□□□□ 0.93
SH2D4AQ9H788 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SH2D4AQ9H788 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SH2D4AQ9H788 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SH2D4AQ9H788 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.88■□□□□ 0.93
SH2D4AQ9H788 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.88■□□□□ 0.93
SH2D4AQ9H788 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.88■□□□□ 0.93
SH2D4AQ9H788 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
SH2D4AQ9H788 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.88■□□□□ 0.93
SH2D4AQ9H788 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.88■□□□□ 0.93
SH2D4AQ9H788 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.88■□□□□ 0.93
SH2D4AQ9H788 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
SH2D4AQ9H788 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.88■□□□□ 0.93
SH2D4AQ9H788 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.88■□□□□ 0.93
SH2D4AQ9H788 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.88■□□□□ 0.93
SH2D4AQ9H788 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.88■□□□□ 0.93
SH2D4AQ9H788 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SH2D4AQ9H788 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SH2D4AQ9H788 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.88■□□□□ 0.93
SH2D4AQ9H788 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SH2D4AQ9H788 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
SH2D4AQ9H788 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.88■□□□□ 0.93
SH2D4AQ9H788 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SH2D4AQ9H788 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.88■□□□□ 0.93
SH2D4AQ9H788 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SH2D4AQ9H788 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.87■□□□□ 0.93
SH2D4AQ9H788 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SH2D4AQ9H788 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
SH2D4AQ9H788 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SH2D4AQ9H788 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SH2D4AQ9H788 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SH2D4AQ9H788 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SH2D4AQ9H788 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SH2D4AQ9H788 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
SH2D4AQ9H788 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SH2D4AQ9H788 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SH2D4AQ9H788 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.87■□□□□ 0.93
SH2D4AQ9H788 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.87■□□□□ 0.93
SH2D4AQ9H788 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.87■□□□□ 0.93
SH2D4AQ9H788 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.87■□□□□ 0.93
SH2D4AQ9H788 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.87■□□□□ 0.93
SH2D4AQ9H788 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.87■□□□□ 0.93
SH2D4AQ9H788 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SH2D4AQ9H788 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.87■□□□□ 0.93
SH2D4AQ9H788 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SH2D4AQ9H788 PHGDH-209ENST00000641074 1780 ntBASIC20.87■□□□□ 0.93
SH2D4AQ9H788 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SH2D4AQ9H788 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.87■□□□□ 0.93
SH2D4AQ9H788 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SH2D4AQ9H788 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SH2D4AQ9H788 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.87■□□□□ 0.93
SH2D4AQ9H788 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SH2D4AQ9H788 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SH2D4AQ9H788 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SH2D4AQ9H788 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SH2D4AQ9H788 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms