Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RNF39Q9H2S5 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.04■□□□□ 0.8
RNF39Q9H2S5 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
RNF39Q9H2S5 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.04■□□□□ 0.8
RNF39Q9H2S5 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF39Q9H2S5 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF39Q9H2S5 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF39Q9H2S5 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.04■□□□□ 0.8
RNF39Q9H2S5 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC20.04■□□□□ 0.8
RNF39Q9H2S5 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC20.04■□□□□ 0.8
RNF39Q9H2S5 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.04■□□□□ 0.8
RNF39Q9H2S5 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
RNF39Q9H2S5 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC20.04■□□□□ 0.8
RNF39Q9H2S5 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC20.04■□□□□ 0.8
RNF39Q9H2S5 AGGF1P7-201ENST00000562369 913 ntBASIC20.04■□□□□ 0.8
RNF39Q9H2S5 AC092329.2-201ENST00000598402 547 ntBASIC20.04■□□□□ 0.8
RNF39Q9H2S5 IGFL2-AS1-203ENST00000598518 1037 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNF39Q9H2S5 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF39Q9H2S5 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
RNF39Q9H2S5 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF39Q9H2S5 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
RNF39Q9H2S5 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNF39Q9H2S5 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.04■□□□□ 0.8
RNF39Q9H2S5 LMO3-224ENST00000540848 1574 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
RNF39Q9H2S5 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF39Q9H2S5 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF39Q9H2S5 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RNF39Q9H2S5 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF39Q9H2S5 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RNF39Q9H2S5 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.03■□□□□ 0.8
RNF39Q9H2S5 Z83836.1-201ENST00000624605 1642 ntBASIC20.03■□□□□ 0.8
RNF39Q9H2S5 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF39Q9H2S5 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RNF39Q9H2S5 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RNF39Q9H2S5 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC20.03■□□□□ 0.8
RNF39Q9H2S5 MTCO2P17-201ENST00000424336 677 ntBASIC20.03■□□□□ 0.8
RNF39Q9H2S5 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.03■□□□□ 0.8
RNF39Q9H2S5 BOLA3P3-201ENST00000505182 232 ntBASIC20.03■□□□□ 0.8
RNF39Q9H2S5 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC20.03■□□□□ 0.8
RNF39Q9H2S5 RNU6-362P-201ENST00000516736 90 ntBASIC20.03■□□□□ 0.8
RNF39Q9H2S5 AC069208.1-206ENST00000538905 832 ntTSL 4 BASIC20.03■□□□□ 0.8
RNF39Q9H2S5 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RNF39Q9H2S5 AP002414.4-201ENST00000589764 1148 ntBASIC20.03■□□□□ 0.8
RNF39Q9H2S5 AC005332.3-201ENST00000589904 676 ntBASIC20.03■□□□□ 0.8
RNF39Q9H2S5 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.03■□□□□ 0.8
RNF39Q9H2S5 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF39Q9H2S5 AC005261.6-201ENST00000623072 1387 ntBASIC20.03■□□□□ 0.8
RNF39Q9H2S5 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF39Q9H2S5 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF39Q9H2S5 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RNF39Q9H2S5 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF39Q9H2S5 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF39Q9H2S5 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF39Q9H2S5 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF39Q9H2S5 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF39Q9H2S5 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF39Q9H2S5 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF39Q9H2S5 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF39Q9H2S5 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
RNF39Q9H2S5 RNU4-86P-201ENST00000410135 219 ntBASIC20.02■□□□□ 0.8
RNF39Q9H2S5 SSR1P2-201ENST00000415208 787 ntBASIC20.02■□□□□ 0.8
RNF39Q9H2S5 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC20.02■□□□□ 0.8
RNF39Q9H2S5 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.02■□□□□ 0.8
RNF39Q9H2S5 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC20.02■□□□□ 0.8
RNF39Q9H2S5 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC20.02■□□□□ 0.8
RNF39Q9H2S5 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF39Q9H2S5 KRT18P41-201ENST00000518924 1277 ntBASIC20.02■□□□□ 0.8
RNF39Q9H2S5 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF39Q9H2S5 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.02■□□□□ 0.8
RNF39Q9H2S5 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC20.02■□□□□ 0.8
RNF39Q9H2S5 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RNF39Q9H2S5 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.02■□□□□ 0.8
RNF39Q9H2S5 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF39Q9H2S5 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF39Q9H2S5 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF39Q9H2S5 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF39Q9H2S5 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF39Q9H2S5 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RNF39Q9H2S5 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.02■□□□□ 0.79
RNF39Q9H2S5 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
RNF39Q9H2S5 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
RNF39Q9H2S5 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.02■□□□□ 0.79
RNF39Q9H2S5 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.02■□□□□ 0.79
RNF39Q9H2S5 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RNF39Q9H2S5 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.02■□□□□ 0.79
RNF39Q9H2S5 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RNF39Q9H2S5 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RNF39Q9H2S5 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.02■□□□□ 0.79
RNF39Q9H2S5 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF39Q9H2S5 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.01■□□□□ 0.79
RNF39Q9H2S5 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF39Q9H2S5 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.01■□□□□ 0.79
RNF39Q9H2S5 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF39Q9H2S5 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF39Q9H2S5 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RNF39Q9H2S5 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
RNF39Q9H2S5 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RNF39Q9H2S5 RBM5-AS1-201ENST00000630404 1386 ntBASIC20.01■□□□□ 0.79
RNF39Q9H2S5 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF39Q9H2S5 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms