RNA–Protein interactions for RNA: ENST00000410135.1

RNU4-86P-201, Transcript of RNA, U4 small nuclear 86, pseudogene, humanhuman

BASIC

Gene RNU4-86P, Length 219 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-86P-201ENST00000410135 AEBP2Q6ZN18 517 aaPredicted RBP31.83■■■□□ 2.69
RNU4-86P-201ENST00000410135 CHIC1Q5VXU3 224 aa30.39■■■□□ 2.46
RNU4-86P-201ENST00000410135 SENP3Q9H4L4 574 aaPredicted RBP26.96■■□□□ 1.91
RNU4-86P-201ENST00000410135 PHF23Q9BUL5 403 aaPredicted RBP26.76■■□□□ 1.87
RNU4-86P-201ENST00000410135 FOXD1Q16676 465 aa25.21■■□□□ 1.63
RNU4-86P-201ENST00000410135 PLPPR3Q6T4P5 718 aa24.35■■□□□ 1.49
RNU4-86P-201ENST00000410135 PPP6R1Q9UPN7 881 aa23.84■■□□□ 1.41
RNU4-86P-201ENST00000410135 ADRA2BP18089 450 aa23.76■■□□□ 1.39
RNU4-86P-201ENST00000410135 PIAS4Q8N2W9 510 aaPredicted RBP23.57■■□□□ 1.36
RNU4-86P-201ENST00000410135 MSH5O43196 834 aa23.36■■□□□ 1.33
RNU4-86P-201ENST00000410135 NISCHQ9Y2I1 1504 aa23.2■■□□□ 1.3
RNU4-86P-201ENST00000410135 POTEDQ86YR6 584 aa22.47■■□□□ 1.19
RNU4-86P-201ENST00000410135 MAPK8IP2Q13387 824 aaPredicted RBP21.78■■□□□ 1.08
RNU4-86P-201ENST00000410135 SCAF1Q9H7N4 1312 aaKnown RBP21.55■■□□□ 1.04
RNU4-86P-201ENST00000410135 DMRT2Q9Y5R5 561 aa21.46■■□□□ 1.03
RNU4-86P-201ENST00000410135 PPP4R3CPQ6ZMV5 832 aa21.44■■□□□ 1.02
RNU4-86P-201ENST00000410135 CNKSR2Q8WXI2 1034 aa20.92■□□□□ 0.94
RNU4-86P-201ENST00000410135 CCDC180Q9P1Z9 1646 aa20.88■□□□□ 0.93
RNU4-86P-201ENST00000410135 HOXD11P31277 338 aaPredicted RBP20.76■□□□□ 0.91
RNU4-86P-201ENST00000410135 RNF216Q9NWF9 866 aaPredicted RBP20.66■□□□□ 0.9
RNU4-86P-201ENST00000410135 ABCC9O60706 1549 aa20.63■□□□□ 0.89
RNU4-86P-201ENST00000410135 DCAF8L1A6NGE4 600 aa20.6■□□□□ 0.89
RNU4-86P-201ENST00000410135 NCBP3Q53F19 620 aaKnown RBP20.6■□□□□ 0.89
RNU4-86P-201ENST00000410135 NPM3O75607 178 aaKnown RBP20.41■□□□□ 0.86
RNU4-86P-201ENST00000410135 KCNA4P22459 653 aa20.29■□□□□ 0.84
RNU4-86P-201ENST00000410135 RNF39Q9H2S5 420 aa20.02■□□□□ 0.8
RNU4-86P-201ENST00000410135 CACNB1Q02641 598 aaPredicted RBP19.95■□□□□ 0.78
RNU4-86P-201ENST00000410135 DNAJC5BQ9UF47 199 aa19.9■□□□□ 0.78
RNU4-86P-201ENST00000410135 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.8■□□□□ 0.76
RNU4-86P-201ENST00000410135 RB1CC1Q8TDY2 1594 aa19.77■□□□□ 0.76
RNU4-86P-201ENST00000410135 C1QBPQ07021 282 aaKnown RBP19.69■□□□□ 0.74
RNU4-86P-201ENST00000410135 NACADO15069 1562 aa19.66■□□□□ 0.74
RNU4-86P-201ENST00000410135 UNC13AQ9UPW8 1703 aa19.48■□□□□ 0.71
RNU4-86P-201ENST00000410135 SLC4A2P04920 1241 aa19.47■□□□□ 0.71
RNU4-86P-201ENST00000410135 DCAF8L2P0C7V8 631 aa19.47■□□□□ 0.71
RNU4-86P-201ENST00000410135 U3KPZ7 1027 aaPredicted RBP19.44■□□□□ 0.7
RNU4-86P-201ENST00000410135 MYO15BQ96JP2 1530 aa19.41■□□□□ 0.7
RNU4-86P-201ENST00000410135 ZCCHC6Q5VYS8 1495 aaKnown RBP19.22■□□□□ 0.67
RNU4-86P-201ENST00000410135 DCAF1Q9Y4B6 1507 aa19.2■□□□□ 0.66
RNU4-86P-201ENST00000410135 PABPN1Q86U42 306 aaKnown RBP eCLIP19.19■□□□□ 0.66
RNU4-86P-201ENST00000410135 BICRAQ9NZM4 1560 aa19.19■□□□□ 0.66
RNU4-86P-201ENST00000410135 SLC4A1APQ9BWU0 796 aaKnown RBP19.15■□□□□ 0.66
RNU4-86P-201ENST00000410135 SPINK5Q9NQ38 1064 aaPredicted RBP19.13■□□□□ 0.65
RNU4-86P-201ENST00000410135 CAPN15O75808 1086 aa19.02■□□□□ 0.64
RNU4-86P-201ENST00000410135 SCRIBQ14160 1630 aa18.92■□□□□ 0.62
RNU4-86P-201ENST00000410135 SHROOM4Q9ULL8 1493 aa18.92■□□□□ 0.62
RNU4-86P-201ENST00000410135 DSG3P32926 999 aa18.87■□□□□ 0.61
RNU4-86P-201ENST00000410135 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.84■□□□□ 0.61
RNU4-86P-201ENST00000410135 HNRNPUL2Q1KMD3 747 aaKnown RBP18.84■□□□□ 0.61
RNU4-86P-201ENST00000410135 TRHP20396 242 aaPredicted RBP18.8■□□□□ 0.6
RNU4-86P-201ENST00000410135 MYCNP04198 464 aaPredicted RBP18.79■□□□□ 0.6
RNU4-86P-201ENST00000410135 SAMD1Q6SPF0 538 aaPredicted RBP18.78■□□□□ 0.6
RNU4-86P-201ENST00000410135 FOXD4L1Q9NU39 408 aa18.77■□□□□ 0.6
RNU4-86P-201ENST00000410135 APLP2Q06481 763 aa18.74■□□□□ 0.59
RNU4-86P-201ENST00000410135 CC2D2AQ9P2K1 1620 aa18.73■□□□□ 0.59
RNU4-86P-201ENST00000410135 ZBTB22O15209 634 aa18.7■□□□□ 0.58
RNU4-86P-201ENST00000410135 EIF4G1Q04637 1599 aaKnown RBP18.69■□□□□ 0.58
RNU4-86P-201ENST00000410135 ZNF219Q9P2Y4 722 aaPredicted RBP18.67■□□□□ 0.58
RNU4-86P-201ENST00000410135 ABCB7O75027 752 aa18.65■□□□□ 0.58
RNU4-86P-201ENST00000410135 CECR2Q9BXF3 1484 aa18.58■□□□□ 0.57
RNU4-86P-201ENST00000410135 ATF5Q9Y2D1 282 aaPredicted RBP18.5■□□□□ 0.55
RNU4-86P-201ENST00000410135 POLA2Q14181 598 aa18.36■□□□□ 0.53
RNU4-86P-201ENST00000410135 ATXN8OSP0DMR3 200 aa18.11■□□□□ 0.49
RNU4-86P-201ENST00000410135 SMARCA4P51532 1647 aa18.11■□□□□ 0.49
RNU4-86P-201ENST00000410135 NCAPD3P42695 1498 aa18.1■□□□□ 0.49
RNU4-86P-201ENST00000410135 CSRNP3Q8WYN3 585 aa18.06■□□□□ 0.48
RNU4-86P-201ENST00000410135 ATAD2BQ9ULI0 1458 aa18.05■□□□□ 0.48
RNU4-86P-201ENST00000410135 SMARCA2P51531 1590 aa18.04■□□□□ 0.48
RNU4-86P-201ENST00000410135 BAZ1AQ9NRL2 1556 aaPredicted RBP18.01■□□□□ 0.47
RNU4-86P-201ENST00000410135 HMGXB3Q12766 1538 aa18■□□□□ 0.47
RNU4-86P-201ENST00000410135 EHMT2Q96KQ7 1210 aa17.96■□□□□ 0.47
RNU4-86P-201ENST00000410135 PEG3Q9GZU2 1588 aa17.95■□□□□ 0.46
RNU4-86P-201ENST00000410135 BAZ1BQ9UIG0 1483 aaKnown RBP17.88■□□□□ 0.45
RNU4-86P-201ENST00000410135 RBM42Q9BTD8 480 aaKnown RBP17.86■□□□□ 0.45
RNU4-86P-201ENST00000410135 MROH2BQ7Z745 1585 aa17.86■□□□□ 0.45
RNU4-86P-201ENST00000410135 ZBTB12Q9Y330 459 aaPredicted RBP17.85■□□□□ 0.45
RNU4-86P-201ENST00000410135 ERCC6Q03468 1493 aa17.82■□□□□ 0.44
RNU4-86P-201ENST00000410135 CUX2O14529 1486 aa17.79■□□□□ 0.44
RNU4-86P-201ENST00000410135 NESP48681 1621 aa17.76■□□□□ 0.43
RNU4-86P-201ENST00000410135 OSCARQ8IYS5 282 aa17.76■□□□□ 0.43
RNU4-86P-201ENST00000410135 LAMC3Q9Y6N6 1575 aa17.74■□□□□ 0.43
RNU4-86P-201ENST00000410135 WIZO95785 1651 aa17.71■□□□□ 0.43
RNU4-86P-201ENST00000410135 KIF21AQ7Z4S6 1674 aa17.67■□□□□ 0.42
RNU4-86P-201ENST00000410135 DNAJC5Q9H3Z4 198 aa17.66■□□□□ 0.42
RNU4-86P-201ENST00000410135 POTEHQ6S545 545 aa17.64■□□□□ 0.41
RNU4-86P-201ENST00000410135 MKRN4PQ13434 485 aaPredicted RBP17.63■□□□□ 0.41
RNU4-86P-201ENST00000410135 THOC2Q8NI27 1593 aaKnown RBP17.62■□□□□ 0.41
RNU4-86P-201ENST00000410135 FBLN2P98095 1184 aa17.58■□□□□ 0.4
RNU4-86P-201ENST00000410135 AKT1S1Q96B36 256 aa17.57■□□□□ 0.4
RNU4-86P-201ENST00000410135 PDS5BQ9NTI5 1447 aa17.56■□□□□ 0.4
RNU4-86P-201ENST00000410135 CADPSQ9ULU8 1353 aa17.53■□□□□ 0.4
RNU4-86P-201ENST00000410135 RSF1Q96T23 1441 aaPredicted RBP17.5■□□□□ 0.39
RNU4-86P-201ENST00000410135 CHRDL2Q6WN34 429 aa17.46■□□□□ 0.39
RNU4-86P-201ENST00000410135 REM2Q8IYK8 340 aaPredicted RBP17.46■□□□□ 0.39
RNU4-86P-201ENST00000410135 TOP2AP11388 1531 aaKnown RBP17.44■□□□□ 0.38
RNU4-86P-201ENST00000410135 PRDM2Q13029 1718 aa17.43■□□□□ 0.38
RNU4-86P-201ENST00000410135 MRC2Q9UBG0 1479 aa17.4■□□□□ 0.38
RNU4-86P-201ENST00000410135 WDR62O43379 1518 aa17.39■□□□□ 0.37
RNU4-86P-201ENST00000410135 SPDYE2BA6NHP3 402 aa17.39■□□□□ 0.37
RNU4-86P-201ENST00000410135 SPDYE6P0CI01 402 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms