Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COMMD4Q9H0A8 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.89■□□□□ 0.13
COMMD4Q9H0A8 AC108860.2-201ENST00000562760 2183 ntBASIC15.89■□□□□ 0.13
COMMD4Q9H0A8 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COMMD4Q9H0A8 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
COMMD4Q9H0A8 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COMMD4Q9H0A8 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COMMD4Q9H0A8 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COMMD4Q9H0A8 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.89■□□□□ 0.13
COMMD4Q9H0A8 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
COMMD4Q9H0A8 TSPY20P-201ENST00000450910 630 ntBASIC15.89■□□□□ 0.13
COMMD4Q9H0A8 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC15.89■□□□□ 0.13
COMMD4Q9H0A8 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC15.89■□□□□ 0.13
COMMD4Q9H0A8 AC116562.2-201ENST00000507042 360 ntBASIC15.89■□□□□ 0.13
COMMD4Q9H0A8 NUDT16P1-203ENST00000513809 620 ntBASIC15.89■□□□□ 0.13
COMMD4Q9H0A8 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC15.89■□□□□ 0.13
COMMD4Q9H0A8 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC15.89■□□□□ 0.13
COMMD4Q9H0A8 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.89■□□□□ 0.13
COMMD4Q9H0A8 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
COMMD4Q9H0A8 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
COMMD4Q9H0A8 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.89■□□□□ 0.13
COMMD4Q9H0A8 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
COMMD4Q9H0A8 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
COMMD4Q9H0A8 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COMMD4Q9H0A8 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COMMD4Q9H0A8 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
COMMD4Q9H0A8 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COMMD4Q9H0A8 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
COMMD4Q9H0A8 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COMMD4Q9H0A8 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.89■□□□□ 0.13
COMMD4Q9H0A8 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
COMMD4Q9H0A8 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
COMMD4Q9H0A8 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.88■□□□□ 0.13
COMMD4Q9H0A8 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
COMMD4Q9H0A8 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
COMMD4Q9H0A8 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
COMMD4Q9H0A8 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.88■□□□□ 0.13
COMMD4Q9H0A8 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
COMMD4Q9H0A8 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
COMMD4Q9H0A8 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COMMD4Q9H0A8 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.88■□□□□ 0.13
COMMD4Q9H0A8 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COMMD4Q9H0A8 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
COMMD4Q9H0A8 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
COMMD4Q9H0A8 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COMMD4Q9H0A8 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
COMMD4Q9H0A8 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
COMMD4Q9H0A8 CRYGFP-201ENST00000418459 633 ntBASIC15.88■□□□□ 0.13
COMMD4Q9H0A8 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC15.88■□□□□ 0.13
COMMD4Q9H0A8 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC15.88■□□□□ 0.13
COMMD4Q9H0A8 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.88■□□□□ 0.13
COMMD4Q9H0A8 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC15.88■□□□□ 0.13
COMMD4Q9H0A8 SPIB-206ENST00000596074 847 ntTSL 2 BASIC15.88■□□□□ 0.13
COMMD4Q9H0A8 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.88■□□□□ 0.13
COMMD4Q9H0A8 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COMMD4Q9H0A8 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.88■□□□□ 0.13
COMMD4Q9H0A8 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.88■□□□□ 0.13
COMMD4Q9H0A8 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
COMMD4Q9H0A8 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
COMMD4Q9H0A8 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.88■□□□□ 0.13
COMMD4Q9H0A8 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COMMD4Q9H0A8 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.88■□□□□ 0.13
COMMD4Q9H0A8 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COMMD4Q9H0A8 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
COMMD4Q9H0A8 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
COMMD4Q9H0A8 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COMMD4Q9H0A8 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COMMD4Q9H0A8 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COMMD4Q9H0A8 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.87■□□□□ 0.13
COMMD4Q9H0A8 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
COMMD4Q9H0A8 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COMMD4Q9H0A8 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.87■□□□□ 0.13
COMMD4Q9H0A8 LINC01126-201ENST00000623515 1646 ntBASIC15.87■□□□□ 0.13
COMMD4Q9H0A8 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC15.87■□□□□ 0.13
COMMD4Q9H0A8 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COMMD4Q9H0A8 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
COMMD4Q9H0A8 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
COMMD4Q9H0A8 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
COMMD4Q9H0A8 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
COMMD4Q9H0A8 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
COMMD4Q9H0A8 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
COMMD4Q9H0A8 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COMMD4Q9H0A8 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
COMMD4Q9H0A8 FDX2-206ENST00000492239 773 ntTSL 2 BASIC15.87■□□□□ 0.13
COMMD4Q9H0A8 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC15.87■□□□□ 0.13
COMMD4Q9H0A8 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC15.87■□□□□ 0.13
COMMD4Q9H0A8 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.87■□□□□ 0.13
COMMD4Q9H0A8 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC15.87■□□□□ 0.13
COMMD4Q9H0A8 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC15.87■□□□□ 0.13
COMMD4Q9H0A8 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
COMMD4Q9H0A8 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC15.87■□□□□ 0.13
COMMD4Q9H0A8 MIR4674-201ENST00000582457 87 ntBASIC15.87■□□□□ 0.13
COMMD4Q9H0A8 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC15.87■□□□□ 0.13
COMMD4Q9H0A8 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.87■□□□□ 0.13
COMMD4Q9H0A8 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.87■□□□□ 0.13
COMMD4Q9H0A8 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
COMMD4Q9H0A8 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
COMMD4Q9H0A8 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
COMMD4Q9H0A8 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COMMD4Q9H0A8 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms