Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
SSBP3Q9BWW4 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSBP3Q9BWW4 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSBP3Q9BWW4 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSBP3Q9BWW4 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
SSBP3Q9BWW4 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSBP3Q9BWW4 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SSBP3Q9BWW4 KRT17P6-201ENST00000453795 1220 ntBASIC14.99□□□□□ -0.01
SSBP3Q9BWW4 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC14.99□□□□□ -0.01
SSBP3Q9BWW4 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.99□□□□□ -0.01
SSBP3Q9BWW4 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
SSBP3Q9BWW4 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC14.99□□□□□ -0.01
SSBP3Q9BWW4 AC009154.2-201ENST00000621177 724 ntBASIC14.99□□□□□ -0.01
SSBP3Q9BWW4 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC14.99□□□□□ -0.01
SSBP3Q9BWW4 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSBP3Q9BWW4 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSBP3Q9BWW4 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
SSBP3Q9BWW4 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SSBP3Q9BWW4 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC14.99□□□□□ -0.01
SSBP3Q9BWW4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSBP3Q9BWW4 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SSBP3Q9BWW4 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSBP3Q9BWW4 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC14.98□□□□□ -0.01
SSBP3Q9BWW4 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SSBP3Q9BWW4 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSBP3Q9BWW4 WAC-202ENST00000347934 2839 ntTSL 5 BASIC14.98□□□□□ -0.01
SSBP3Q9BWW4 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC14.98□□□□□ -0.01
SSBP3Q9BWW4 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
SSBP3Q9BWW4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SSBP3Q9BWW4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SSBP3Q9BWW4 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SSBP3Q9BWW4 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC14.98□□□□□ -0.01
SSBP3Q9BWW4 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
SSBP3Q9BWW4 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SSBP3Q9BWW4 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSBP3Q9BWW4 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SSBP3Q9BWW4 WIZP1-201ENST00000531444 2299 ntBASIC14.98□□□□□ -0.01
SSBP3Q9BWW4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SSBP3Q9BWW4 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SSBP3Q9BWW4 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC14.98□□□□□ -0.01
SSBP3Q9BWW4 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SSBP3Q9BWW4 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SSBP3Q9BWW4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SSBP3Q9BWW4 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSBP3Q9BWW4 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSBP3Q9BWW4 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
SSBP3Q9BWW4 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SSBP3Q9BWW4 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.98□□□□□ -0.01
SSBP3Q9BWW4 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC14.98□□□□□ -0.01
SSBP3Q9BWW4 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC14.98□□□□□ -0.01
SSBP3Q9BWW4 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.98□□□□□ -0.01
SSBP3Q9BWW4 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.98□□□□□ -0.01
SSBP3Q9BWW4 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC14.98□□□□□ -0.01
SSBP3Q9BWW4 AL121772.3-201ENST00000610840 674 ntBASIC14.98□□□□□ -0.01
SSBP3Q9BWW4 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SSBP3Q9BWW4 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSBP3Q9BWW4 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
SSBP3Q9BWW4 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSBP3Q9BWW4 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSBP3Q9BWW4 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP3Q9BWW4 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SSBP3Q9BWW4 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP3Q9BWW4 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP3Q9BWW4 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP3Q9BWW4 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
SSBP3Q9BWW4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP3Q9BWW4 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP3Q9BWW4 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP3Q9BWW4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP3Q9BWW4 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP3Q9BWW4 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP3Q9BWW4 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP3Q9BWW4 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC14.97□□□□□ -0.01
SSBP3Q9BWW4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP3Q9BWW4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP3Q9BWW4 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP3Q9BWW4 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.97□□□□□ -0.01
SSBP3Q9BWW4 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP3Q9BWW4 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.97□□□□□ -0.01
SSBP3Q9BWW4 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.97□□□□□ -0.01
SSBP3Q9BWW4 KRT18P65-201ENST00000439811 1286 ntBASIC14.97□□□□□ -0.01
SSBP3Q9BWW4 MINOS1P3-201ENST00000457048 203 ntBASIC14.97□□□□□ -0.01
SSBP3Q9BWW4 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
SSBP3Q9BWW4 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.97□□□□□ -0.01
SSBP3Q9BWW4 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP3Q9BWW4 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP3Q9BWW4 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC14.97□□□□□ -0.01
SSBP3Q9BWW4 AC111152.3-201ENST00000569699 673 ntBASIC14.97□□□□□ -0.01
SSBP3Q9BWW4 LINC01711-201ENST00000598340 967 ntBASIC14.97□□□□□ -0.01
SSBP3Q9BWW4 AC099336.1-202ENST00000602961 463 ntBASIC14.97□□□□□ -0.01
SSBP3Q9BWW4 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.97□□□□□ -0.01
SSBP3Q9BWW4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP3Q9BWW4 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SSBP3Q9BWW4 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP3Q9BWW4 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP3Q9BWW4 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
SSBP3Q9BWW4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP3Q9BWW4 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP3Q9BWW4 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP3Q9BWW4 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms