Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LIMD2Q9BT23 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LIMD2Q9BT23 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LIMD2Q9BT23 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LIMD2Q9BT23 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LIMD2Q9BT23 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LIMD2Q9BT23 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LIMD2Q9BT23 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
LIMD2Q9BT23 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC10.74□□□□□ -0.69
LIMD2Q9BT23 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
LIMD2Q9BT23 AC128688.1-201ENST00000487626 519 ntBASIC10.74□□□□□ -0.69
LIMD2Q9BT23 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LIMD2Q9BT23 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC10.74□□□□□ -0.69
LIMD2Q9BT23 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LIMD2Q9BT23 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC10.74□□□□□ -0.69
LIMD2Q9BT23 MIR3180-5-201ENST00000583743 153 ntBASIC10.74□□□□□ -0.69
LIMD2Q9BT23 REXO1L10P-201ENST00000615707 1290 ntBASIC10.74□□□□□ -0.69
LIMD2Q9BT23 REXO1L12P-201ENST00000622156 912 ntBASIC10.74□□□□□ -0.69
LIMD2Q9BT23 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
LIMD2Q9BT23 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC10.74□□□□□ -0.69
LIMD2Q9BT23 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LIMD2Q9BT23 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LIMD2Q9BT23 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
LIMD2Q9BT23 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC10.74□□□□□ -0.69
LIMD2Q9BT23 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
LIMD2Q9BT23 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC10.74□□□□□ -0.69
LIMD2Q9BT23 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC10.74□□□□□ -0.69
LIMD2Q9BT23 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LIMD2Q9BT23 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LIMD2Q9BT23 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC10.74□□□□□ -0.69
LIMD2Q9BT23 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
LIMD2Q9BT23 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC10.74□□□□□ -0.69
LIMD2Q9BT23 MTMR9LP-203ENST00000426597 1545 ntBASIC10.74□□□□□ -0.69
LIMD2Q9BT23 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LIMD2Q9BT23 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 MESTP1-201ENST00000404287 994 ntBASIC10.73□□□□□ -0.69
LIMD2Q9BT23 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 AC116562.4-202ENST00000641738 218 ntBASIC10.73□□□□□ -0.69
LIMD2Q9BT23 AL596257.1-201ENST00000641463 2694 ntBASIC10.73□□□□□ -0.69
LIMD2Q9BT23 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 SNAI3-AS1-205ENST00000568633 2096 ntBASIC10.73□□□□□ -0.69
LIMD2Q9BT23 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 KRT8P7-201ENST00000533003 1432 ntBASIC10.73□□□□□ -0.69
LIMD2Q9BT23 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
LIMD2Q9BT23 NFYC-AS1-201ENST00000606277 1687 ntBASIC10.73□□□□□ -0.69
LIMD2Q9BT23 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
LIMD2Q9BT23 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LIMD2Q9BT23 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
LIMD2Q9BT23 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
LIMD2Q9BT23 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC10.72□□□□□ -0.69
LIMD2Q9BT23 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms