Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.81■□□□□ 0.6
SMOQ99835 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMOQ99835 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMOQ99835 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMOQ99835 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SMOQ99835 AC010460.3-201ENST00000511359 1579 ntBASIC18.81■□□□□ 0.6
SMOQ99835 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SMOQ99835 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SMOQ99835 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SMOQ99835 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMOQ99835 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMOQ99835 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.81■□□□□ 0.6
SMOQ99835 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SMOQ99835 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMOQ99835 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMOQ99835 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.81■□□□□ 0.6
SMOQ99835 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMOQ99835 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMOQ99835 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SMOQ99835 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.81■□□□□ 0.6
SMOQ99835 AC007967.3-201ENST00000434308 558 ntBASIC18.81■□□□□ 0.6
SMOQ99835 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.81■□□□□ 0.6
SMOQ99835 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMOQ99835 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.81■□□□□ 0.6
SMOQ99835 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.81■□□□□ 0.6
SMOQ99835 AC111152.3-201ENST00000569699 673 ntBASIC18.81■□□□□ 0.6
SMOQ99835 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.81■□□□□ 0.6
SMOQ99835 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SMOQ99835 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SMOQ99835 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMOQ99835 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMOQ99835 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.81■□□□□ 0.6
SMOQ99835 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMOQ99835 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.81■□□□□ 0.6
SMOQ99835 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMOQ99835 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.81■□□□□ 0.6
SMOQ99835 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMOQ99835 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMOQ99835 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SMOQ99835 INTS4P1-201ENST00000438455 1935 ntBASIC18.8■□□□□ 0.6
SMOQ99835 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SMOQ99835 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMOQ99835 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.8■□□□□ 0.6
SMOQ99835 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMOQ99835 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMOQ99835 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SMOQ99835 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SMOQ99835 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SMOQ99835 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.8■□□□□ 0.6
SMOQ99835 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.8■□□□□ 0.6
SMOQ99835 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
SMOQ99835 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMOQ99835 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SMOQ99835 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SMOQ99835 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.8■□□□□ 0.6
SMOQ99835 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMOQ99835 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.8■□□□□ 0.6
SMOQ99835 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SMOQ99835 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.8■□□□□ 0.6
SMOQ99835 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.8■□□□□ 0.6
SMOQ99835 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.8■□□□□ 0.6
SMOQ99835 RN7SL510P-201ENST00000581311 263 ntBASIC18.8■□□□□ 0.6
SMOQ99835 AL591684.3-201ENST00000605187 298 ntBASIC18.8■□□□□ 0.6
SMOQ99835 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMOQ99835 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMOQ99835 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.8■□□□□ 0.6
SMOQ99835 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMOQ99835 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SMOQ99835 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMOQ99835 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMOQ99835 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMOQ99835 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMOQ99835 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.8■□□□□ 0.6
SMOQ99835 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMOQ99835 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.8■□□□□ 0.6
SMOQ99835 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.8■□□□□ 0.6
SMOQ99835 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.8■□□□□ 0.6
SMOQ99835 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SMOQ99835 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMOQ99835 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMOQ99835 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.79■□□□□ 0.6
SMOQ99835 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SMOQ99835 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMOQ99835 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMOQ99835 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.79■□□□□ 0.6
SMOQ99835 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.79■□□□□ 0.6
SMOQ99835 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMOQ99835 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SMOQ99835 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SMOQ99835 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.79■□□□□ 0.6
SMOQ99835 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
SMOQ99835 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.79■□□□□ 0.6
SMOQ99835 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.79■□□□□ 0.6
SMOQ99835 EMBP1-201ENST00000458200 901 ntBASIC18.79■□□□□ 0.6
SMOQ99835 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.79■□□□□ 0.6
SMOQ99835 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.79■□□□□ 0.6
SMOQ99835 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
SMOQ99835 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.79■□□□□ 0.6
SMOQ99835 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.79■□□□□ 0.6
SMOQ99835 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms