Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 IGHGP-201ENST00000390555 1178 ntBASIC19.05■□□□□ 0.64
PCDHB18PQ96TA0 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDHB18PQ96TA0 HOMER2P1-201ENST00000455653 964 ntBASIC19.05■□□□□ 0.64
PCDHB18PQ96TA0 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB18PQ96TA0 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
PCDHB18PQ96TA0 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.05■□□□□ 0.64
PCDHB18PQ96TA0 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.05■□□□□ 0.64
PCDHB18PQ96TA0 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB18PQ96TA0 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB18PQ96TA0 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB18PQ96TA0 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB18PQ96TA0 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
PCDHB18PQ96TA0 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB18PQ96TA0 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB18PQ96TA0 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB18PQ96TA0 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB18PQ96TA0 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PCDHB18PQ96TA0 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB18PQ96TA0 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB18PQ96TA0 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB18PQ96TA0 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHB18PQ96TA0 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB18PQ96TA0 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB18PQ96TA0 FAM8A6P-201ENST00000407496 1135 ntBASIC19.04■□□□□ 0.64
PCDHB18PQ96TA0 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.04■□□□□ 0.64
PCDHB18PQ96TA0 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.04■□□□□ 0.64
PCDHB18PQ96TA0 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB18PQ96TA0 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHB18PQ96TA0 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB18PQ96TA0 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.04■□□□□ 0.64
PCDHB18PQ96TA0 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.04■□□□□ 0.64
PCDHB18PQ96TA0 RN7SL850P-201ENST00000579959 291 ntBASIC19.04■□□□□ 0.64
PCDHB18PQ96TA0 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PCDHB18PQ96TA0 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
PCDHB18PQ96TA0 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHB18PQ96TA0 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
PCDHB18PQ96TA0 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB18PQ96TA0 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB18PQ96TA0 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PCDHB18PQ96TA0 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PCDHB18PQ96TA0 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB18PQ96TA0 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB18PQ96TA0 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB18PQ96TA0 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB18PQ96TA0 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB18PQ96TA0 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB18PQ96TA0 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB18PQ96TA0 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB18PQ96TA0 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHB18PQ96TA0 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHB18PQ96TA0 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB18PQ96TA0 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB18PQ96TA0 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB18PQ96TA0 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
PCDHB18PQ96TA0 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB18PQ96TA0 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB18PQ96TA0 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB18PQ96TA0 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHB18PQ96TA0 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB18PQ96TA0 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB18PQ96TA0 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB18PQ96TA0 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB18PQ96TA0 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB18PQ96TA0 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.03■□□□□ 0.64
PCDHB18PQ96TA0 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB18PQ96TA0 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.03■□□□□ 0.64
PCDHB18PQ96TA0 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHB18PQ96TA0 RNF126P1-202ENST00000569893 925 ntBASIC19.03■□□□□ 0.64
PCDHB18PQ96TA0 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB18PQ96TA0 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.03■□□□□ 0.64
PCDHB18PQ96TA0 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHB18PQ96TA0 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB18PQ96TA0 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHB18PQ96TA0 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB18PQ96TA0 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
PCDHB18PQ96TA0 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PCDHB18PQ96TA0 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHB18PQ96TA0 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHB18PQ96TA0 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB18PQ96TA0 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB18PQ96TA0 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
PCDHB18PQ96TA0 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
PCDHB18PQ96TA0 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PCDHB18PQ96TA0 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB18PQ96TA0 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB18PQ96TA0 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDHB18PQ96TA0 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB18PQ96TA0 AC141586.5-201ENST00000624546 2050 ntBASIC19.02■□□□□ 0.64
PCDHB18PQ96TA0 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDHB18PQ96TA0 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB18PQ96TA0 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB18PQ96TA0 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDHB18PQ96TA0 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB18PQ96TA0 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB18PQ96TA0 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB18PQ96TA0 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB18PQ96TA0 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB18PQ96TA0 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
PCDHB18PQ96TA0 AP003733.1-201ENST00000491725 852 ntBASIC19.02■□□□□ 0.64
PCDHB18PQ96TA0 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms