Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
MS4A4EQ96PG1 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A4EQ96PG1 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A4EQ96PG1 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A4EQ96PG1 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.79■□□□□ 0.28
MS4A4EQ96PG1 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A4EQ96PG1 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A4EQ96PG1 HBZP1-201ENST00000354915 429 ntBASIC16.79■□□□□ 0.28
MS4A4EQ96PG1 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A4EQ96PG1 RCN1P1-201ENST00000400413 996 ntBASIC16.79■□□□□ 0.28
MS4A4EQ96PG1 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.28
MS4A4EQ96PG1 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.79■□□□□ 0.28
MS4A4EQ96PG1 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.79■□□□□ 0.28
MS4A4EQ96PG1 ZNF444P1-201ENST00000559497 298 ntBASIC16.79■□□□□ 0.28
MS4A4EQ96PG1 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.79■□□□□ 0.28
MS4A4EQ96PG1 RN7SL850P-201ENST00000579959 291 ntBASIC16.79■□□□□ 0.28
MS4A4EQ96PG1 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A4EQ96PG1 AC006116.8-202ENST00000587620 1550 ntBASIC16.79■□□□□ 0.28
MS4A4EQ96PG1 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A4EQ96PG1 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A4EQ96PG1 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A4EQ96PG1 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A4EQ96PG1 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A4EQ96PG1 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A4EQ96PG1 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
MS4A4EQ96PG1 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A4EQ96PG1 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A4EQ96PG1 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A4EQ96PG1 AC100803.2-201ENST00000562459 1963 ntBASIC16.78■□□□□ 0.28
MS4A4EQ96PG1 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.78■□□□□ 0.28
MS4A4EQ96PG1 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MS4A4EQ96PG1 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MS4A4EQ96PG1 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MS4A4EQ96PG1 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MS4A4EQ96PG1 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
MS4A4EQ96PG1 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
MS4A4EQ96PG1 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.78■□□□□ 0.28
MS4A4EQ96PG1 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
MS4A4EQ96PG1 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
MS4A4EQ96PG1 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MS4A4EQ96PG1 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.78■□□□□ 0.28
MS4A4EQ96PG1 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.78■□□□□ 0.28
MS4A4EQ96PG1 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MS4A4EQ96PG1 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MS4A4EQ96PG1 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
MS4A4EQ96PG1 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MS4A4EQ96PG1 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MS4A4EQ96PG1 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MS4A4EQ96PG1 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.78■□□□□ 0.28
MS4A4EQ96PG1 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.78■□□□□ 0.28
MS4A4EQ96PG1 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MS4A4EQ96PG1 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.78■□□□□ 0.28
MS4A4EQ96PG1 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.78■□□□□ 0.28
MS4A4EQ96PG1 AC063952.2-201ENST00000498792 1227 ntBASIC16.78■□□□□ 0.28
MS4A4EQ96PG1 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.78■□□□□ 0.28
MS4A4EQ96PG1 AC022616.7-201ENST00000525383 220 ntBASIC16.78■□□□□ 0.28
MS4A4EQ96PG1 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.78■□□□□ 0.28
MS4A4EQ96PG1 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
MS4A4EQ96PG1 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.78■□□□□ 0.28
MS4A4EQ96PG1 LINC01238-205ENST00000567549 1107 ntBASIC16.78■□□□□ 0.28
MS4A4EQ96PG1 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.78■□□□□ 0.28
MS4A4EQ96PG1 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.78■□□□□ 0.28
MS4A4EQ96PG1 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.78■□□□□ 0.28
MS4A4EQ96PG1 AC004263.2-201ENST00000617183 678 ntBASIC16.78■□□□□ 0.28
MS4A4EQ96PG1 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.78■□□□□ 0.28
MS4A4EQ96PG1 AC012317.2-201ENST00000623305 2251 ntBASIC16.78■□□□□ 0.28
MS4A4EQ96PG1 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
MS4A4EQ96PG1 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.78■□□□□ 0.28
MS4A4EQ96PG1 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MS4A4EQ96PG1 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.78■□□□□ 0.28
MS4A4EQ96PG1 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
MS4A4EQ96PG1 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MS4A4EQ96PG1 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MS4A4EQ96PG1 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MS4A4EQ96PG1 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
MS4A4EQ96PG1 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MS4A4EQ96PG1 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
MS4A4EQ96PG1 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MS4A4EQ96PG1 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MS4A4EQ96PG1 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MS4A4EQ96PG1 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MS4A4EQ96PG1 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MS4A4EQ96PG1 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MS4A4EQ96PG1 MIR662-201ENST00000384847 95 ntBASIC16.77■□□□□ 0.28
MS4A4EQ96PG1 IGHGP-201ENST00000390555 1178 ntBASIC16.77■□□□□ 0.28
MS4A4EQ96PG1 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MS4A4EQ96PG1 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.77■□□□□ 0.28
MS4A4EQ96PG1 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MS4A4EQ96PG1 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.77■□□□□ 0.28
MS4A4EQ96PG1 AC104076.2-201ENST00000448912 469 ntBASIC16.77■□□□□ 0.28
MS4A4EQ96PG1 AP003733.1-201ENST00000491725 852 ntBASIC16.77■□□□□ 0.28
MS4A4EQ96PG1 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.77■□□□□ 0.28
MS4A4EQ96PG1 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MS4A4EQ96PG1 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MS4A4EQ96PG1 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
MS4A4EQ96PG1 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.77■□□□□ 0.27
MS4A4EQ96PG1 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.77■□□□□ 0.27
MS4A4EQ96PG1 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
MS4A4EQ96PG1 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
MS4A4EQ96PG1 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms