Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM47Q96LD4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM47Q96LD4 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
TRIM47Q96LD4 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM47Q96LD4 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM47Q96LD4 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM47Q96LD4 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM47Q96LD4 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.98■□□□□ 0.95
TRIM47Q96LD4 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
TRIM47Q96LD4 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.98■□□□□ 0.95
TRIM47Q96LD4 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.98■□□□□ 0.95
TRIM47Q96LD4 AC027796.2-201ENST00000575326 344 ntBASIC20.98■□□□□ 0.95
TRIM47Q96LD4 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM47Q96LD4 AC010327.4-202ENST00000591484 748 ntBASIC20.98■□□□□ 0.95
TRIM47Q96LD4 AP001160.2-201ENST00000596071 487 ntBASIC20.98■□□□□ 0.95
TRIM47Q96LD4 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.98■□□□□ 0.95
TRIM47Q96LD4 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM47Q96LD4 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.98■□□□□ 0.95
TRIM47Q96LD4 AC083906.6-201ENST00000641366 219 ntBASIC20.98■□□□□ 0.95
TRIM47Q96LD4 TP73-AS1-210ENST00000637775 1455 ntBASIC20.98■□□□□ 0.95
TRIM47Q96LD4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM47Q96LD4 AC022898.2-201ENST00000616822 1312 ntBASIC20.98■□□□□ 0.95
TRIM47Q96LD4 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM47Q96LD4 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM47Q96LD4 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM47Q96LD4 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM47Q96LD4 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.97■□□□□ 0.95
TRIM47Q96LD4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM47Q96LD4 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM47Q96LD4 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM47Q96LD4 AC009113.1-201ENST00000570267 2443 ntBASIC20.97■□□□□ 0.95
TRIM47Q96LD4 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM47Q96LD4 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM47Q96LD4 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM47Q96LD4 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM47Q96LD4 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM47Q96LD4 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM47Q96LD4 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM47Q96LD4 RPSAP43-201ENST00000402237 625 ntBASIC20.97■□□□□ 0.95
TRIM47Q96LD4 MED15P5-201ENST00000423150 992 ntBASIC20.97■□□□□ 0.95
TRIM47Q96LD4 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.97■□□□□ 0.95
TRIM47Q96LD4 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC20.97■□□□□ 0.95
TRIM47Q96LD4 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC20.97■□□□□ 0.95
TRIM47Q96LD4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.97■□□□□ 0.95
TRIM47Q96LD4 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC20.97■□□□□ 0.95
TRIM47Q96LD4 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC20.97■□□□□ 0.95
TRIM47Q96LD4 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC20.97■□□□□ 0.95
TRIM47Q96LD4 AC005336.2-201ENST00000593183 939 ntBASIC20.97■□□□□ 0.95
TRIM47Q96LD4 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC20.97■□□□□ 0.95
TRIM47Q96LD4 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.97■□□□□ 0.95
TRIM47Q96LD4 FAM197Y3-203ENST00000618346 717 ntBASIC20.97■□□□□ 0.95
TRIM47Q96LD4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM47Q96LD4 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
TRIM47Q96LD4 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM47Q96LD4 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM47Q96LD4 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM47Q96LD4 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM47Q96LD4 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM47Q96LD4 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.97■□□□□ 0.95
TRIM47Q96LD4 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.97■□□□□ 0.95
TRIM47Q96LD4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM47Q96LD4 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.97■□□□□ 0.95
TRIM47Q96LD4 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.97■□□□□ 0.95
TRIM47Q96LD4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.96■□□□□ 0.95
TRIM47Q96LD4 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM47Q96LD4 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM47Q96LD4 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM47Q96LD4 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM47Q96LD4 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM47Q96LD4 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM47Q96LD4 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM47Q96LD4 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
TRIM47Q96LD4 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM47Q96LD4 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.96■□□□□ 0.95
TRIM47Q96LD4 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.96■□□□□ 0.95
TRIM47Q96LD4 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
TRIM47Q96LD4 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM47Q96LD4 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.96■□□□□ 0.95
TRIM47Q96LD4 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.96■□□□□ 0.95
TRIM47Q96LD4 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM47Q96LD4 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM47Q96LD4 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM47Q96LD4 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM47Q96LD4 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM47Q96LD4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.96■□□□□ 0.95
TRIM47Q96LD4 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.95
TRIM47Q96LD4 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
TRIM47Q96LD4 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
TRIM47Q96LD4 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM47Q96LD4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
TRIM47Q96LD4 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM47Q96LD4 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
TRIM47Q96LD4 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
TRIM47Q96LD4 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.95■□□□□ 0.94
TRIM47Q96LD4 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.95■□□□□ 0.94
TRIM47Q96LD4 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM47Q96LD4 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM47Q96LD4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM47Q96LD4 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
TRIM47Q96LD4 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms