Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SNX27Q96L92 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNX27Q96L92 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SNX27Q96L92 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
SNX27Q96L92 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.35■□□□□ 0.69
SNX27Q96L92 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.34■□□□□ 0.69
SNX27Q96L92 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX27Q96L92 REXO1L9P-201ENST00000604264 2108 ntBASIC19.34■□□□□ 0.69
SNX27Q96L92 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.34■□□□□ 0.69
SNX27Q96L92 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.34■□□□□ 0.69
SNX27Q96L92 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX27Q96L92 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX27Q96L92 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX27Q96L92 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.34■□□□□ 0.69
SNX27Q96L92 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SNX27Q96L92 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SNX27Q96L92 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX27Q96L92 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
SNX27Q96L92 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.34■□□□□ 0.69
SNX27Q96L92 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SNX27Q96L92 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.34■□□□□ 0.69
SNX27Q96L92 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SNX27Q96L92 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX27Q96L92 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX27Q96L92 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SNX27Q96L92 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.34■□□□□ 0.69
SNX27Q96L92 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX27Q96L92 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
SNX27Q96L92 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.33■□□□□ 0.69
SNX27Q96L92 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.33■□□□□ 0.69
SNX27Q96L92 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SNX27Q96L92 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.33■□□□□ 0.69
SNX27Q96L92 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.33■□□□□ 0.69
SNX27Q96L92 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SNX27Q96L92 AC097374.2-201ENST00000618617 1306 ntBASIC19.33■□□□□ 0.69
SNX27Q96L92 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SNX27Q96L92 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SNX27Q96L92 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SNX27Q96L92 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
SNX27Q96L92 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SNX27Q96L92 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SNX27Q96L92 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
SNX27Q96L92 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SNX27Q96L92 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SNX27Q96L92 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SNX27Q96L92 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SNX27Q96L92 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.33■□□□□ 0.68
SNX27Q96L92 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.33■□□□□ 0.68
SNX27Q96L92 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.33■□□□□ 0.68
SNX27Q96L92 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SNX27Q96L92 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
SNX27Q96L92 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.33■□□□□ 0.68
SNX27Q96L92 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SNX27Q96L92 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SNX27Q96L92 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SNX27Q96L92 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.33■□□□□ 0.68
SNX27Q96L92 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SNX27Q96L92 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
SNX27Q96L92 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
SNX27Q96L92 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.33■□□□□ 0.68
SNX27Q96L92 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.33■□□□□ 0.68
SNX27Q96L92 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
SNX27Q96L92 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SNX27Q96L92 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.32■□□□□ 0.68
SNX27Q96L92 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNX27Q96L92 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SNX27Q96L92 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNX27Q96L92 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.32■□□□□ 0.68
SNX27Q96L92 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.32■□□□□ 0.68
SNX27Q96L92 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SNX27Q96L92 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNX27Q96L92 AC096633.1-201ENST00000422446 749 ntBASIC19.32■□□□□ 0.68
SNX27Q96L92 AC007967.3-201ENST00000434308 558 ntBASIC19.32■□□□□ 0.68
SNX27Q96L92 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.32■□□□□ 0.68
SNX27Q96L92 AL662844.1-201ENST00000546340 181 ntBASIC19.32■□□□□ 0.68
SNX27Q96L92 SLC25A6P4-201ENST00000586535 553 ntBASIC19.32■□□□□ 0.68
SNX27Q96L92 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.32■□□□□ 0.68
SNX27Q96L92 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.32■□□□□ 0.68
SNX27Q96L92 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNX27Q96L92 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SNX27Q96L92 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
SNX27Q96L92 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SNX27Q96L92 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.32■□□□□ 0.68
SNX27Q96L92 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SNX27Q96L92 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNX27Q96L92 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNX27Q96L92 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
SNX27Q96L92 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNX27Q96L92 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SNX27Q96L92 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.32■□□□□ 0.68
SNX27Q96L92 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.32■□□□□ 0.68
SNX27Q96L92 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SNX27Q96L92 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNX27Q96L92 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SNX27Q96L92 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SNX27Q96L92 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNX27Q96L92 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNX27Q96L92 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SNX27Q96L92 AC132008.2-207ENST00000454517 770 ntBASIC19.31■□□□□ 0.68
SNX27Q96L92 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms