Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.16■□□□□ 0.5
LRRC39Q96DD0 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
LRRC39Q96DD0 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.16■□□□□ 0.5
LRRC39Q96DD0 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC39Q96DD0 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
LRRC39Q96DD0 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC39Q96DD0 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC39Q96DD0 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC39Q96DD0 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.16■□□□□ 0.5
LRRC39Q96DD0 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC39Q96DD0 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC39Q96DD0 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.15■□□□□ 0.5
LRRC39Q96DD0 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.15■□□□□ 0.5
LRRC39Q96DD0 KRT89P-201ENST00000620027 1478 ntBASIC18.15■□□□□ 0.5
LRRC39Q96DD0 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LRRC39Q96DD0 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC39Q96DD0 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC39Q96DD0 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC39Q96DD0 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.15■□□□□ 0.5
LRRC39Q96DD0 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.15■□□□□ 0.5
LRRC39Q96DD0 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.15■□□□□ 0.5
LRRC39Q96DD0 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.15■□□□□ 0.5
LRRC39Q96DD0 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.15■□□□□ 0.5
LRRC39Q96DD0 LINC01451-201ENST00000623792 534 ntBASIC18.15■□□□□ 0.5
LRRC39Q96DD0 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
LRRC39Q96DD0 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC39Q96DD0 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC39Q96DD0 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC39Q96DD0 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC39Q96DD0 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
LRRC39Q96DD0 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC39Q96DD0 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC39Q96DD0 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC39Q96DD0 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC39Q96DD0 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
LRRC39Q96DD0 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC39Q96DD0 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC39Q96DD0 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC39Q96DD0 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC39Q96DD0 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
LRRC39Q96DD0 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.5
LRRC39Q96DD0 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
LRRC39Q96DD0 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.14■□□□□ 0.5
LRRC39Q96DD0 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.14■□□□□ 0.5
LRRC39Q96DD0 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
LRRC39Q96DD0 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC39Q96DD0 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC39Q96DD0 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.14■□□□□ 0.49
LRRC39Q96DD0 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC39Q96DD0 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC39Q96DD0 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC39Q96DD0 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.14■□□□□ 0.49
LRRC39Q96DD0 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC39Q96DD0 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.14■□□□□ 0.49
LRRC39Q96DD0 MMP23A-201ENST00000234610 1017 ntBASIC18.14■□□□□ 0.49
LRRC39Q96DD0 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC39Q96DD0 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC39Q96DD0 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC39Q96DD0 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.14■□□□□ 0.49
LRRC39Q96DD0 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.14■□□□□ 0.49
LRRC39Q96DD0 DDX43P3-201ENST00000441064 443 ntBASIC18.14■□□□□ 0.49
LRRC39Q96DD0 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.14■□□□□ 0.49
LRRC39Q96DD0 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.14■□□□□ 0.49
LRRC39Q96DD0 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.14■□□□□ 0.49
LRRC39Q96DD0 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.14■□□□□ 0.49
LRRC39Q96DD0 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
LRRC39Q96DD0 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.14■□□□□ 0.49
LRRC39Q96DD0 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.14■□□□□ 0.49
LRRC39Q96DD0 MIR4497-201ENST00000583208 89 ntBASIC18.14■□□□□ 0.49
LRRC39Q96DD0 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC39Q96DD0 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.14■□□□□ 0.49
LRRC39Q96DD0 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC39Q96DD0 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC39Q96DD0 LINC00602-201ENST00000629776 2065 ntBASIC18.14■□□□□ 0.49
LRRC39Q96DD0 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC39Q96DD0 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
LRRC39Q96DD0 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.14■□□□□ 0.49
LRRC39Q96DD0 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC39Q96DD0 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.14■□□□□ 0.49
LRRC39Q96DD0 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.14■□□□□ 0.49
LRRC39Q96DD0 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC39Q96DD0 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC39Q96DD0 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.14■□□□□ 0.49
LRRC39Q96DD0 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC39Q96DD0 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
LRRC39Q96DD0 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.14■□□□□ 0.49
LRRC39Q96DD0 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC39Q96DD0 KRT8P9-201ENST00000558927 1449 ntBASIC18.14■□□□□ 0.49
LRRC39Q96DD0 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC39Q96DD0 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
LRRC39Q96DD0 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
LRRC39Q96DD0 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
LRRC39Q96DD0 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC39Q96DD0 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
LRRC39Q96DD0 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC39Q96DD0 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
LRRC39Q96DD0 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
LRRC39Q96DD0 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.13■□□□□ 0.49
LRRC39Q96DD0 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC39Q96DD0 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms