Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.92■□□□□ 0.14
APH1AQ96BI3 MIR3180-1-201ENST00000580374 94 ntBASIC15.92■□□□□ 0.14
APH1AQ96BI3 MIR3180-3-201ENST00000584616 94 ntBASIC15.92■□□□□ 0.14
APH1AQ96BI3 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.92■□□□□ 0.14
APH1AQ96BI3 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.92■□□□□ 0.14
APH1AQ96BI3 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
APH1AQ96BI3 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.92■□□□□ 0.14
APH1AQ96BI3 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC15.92■□□□□ 0.14
APH1AQ96BI3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
APH1AQ96BI3 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
APH1AQ96BI3 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
APH1AQ96BI3 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
APH1AQ96BI3 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
APH1AQ96BI3 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
APH1AQ96BI3 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
APH1AQ96BI3 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
APH1AQ96BI3 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
APH1AQ96BI3 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
APH1AQ96BI3 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
APH1AQ96BI3 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
APH1AQ96BI3 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC15.91■□□□□ 0.14
APH1AQ96BI3 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
APH1AQ96BI3 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
APH1AQ96BI3 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
APH1AQ96BI3 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
APH1AQ96BI3 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
APH1AQ96BI3 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC15.91■□□□□ 0.14
APH1AQ96BI3 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
APH1AQ96BI3 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
APH1AQ96BI3 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
APH1AQ96BI3 AC246785.2-201ENST00000432512 513 ntBASIC15.91■□□□□ 0.14
APH1AQ96BI3 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
APH1AQ96BI3 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.91■□□□□ 0.14
APH1AQ96BI3 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.91■□□□□ 0.14
APH1AQ96BI3 DUTP2-201ENST00000519164 463 ntBASIC15.91■□□□□ 0.14
APH1AQ96BI3 AP000867.3-201ENST00000524675 377 ntBASIC15.91■□□□□ 0.14
APH1AQ96BI3 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
APH1AQ96BI3 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.91■□□□□ 0.14
APH1AQ96BI3 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
APH1AQ96BI3 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
APH1AQ96BI3 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
APH1AQ96BI3 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
APH1AQ96BI3 ABALON-201ENST00000629058 1903 ntBASIC15.91■□□□□ 0.14
APH1AQ96BI3 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
APH1AQ96BI3 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.91■□□□□ 0.14
APH1AQ96BI3 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
APH1AQ96BI3 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.91■□□□□ 0.14
APH1AQ96BI3 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.91■□□□□ 0.14
APH1AQ96BI3 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
APH1AQ96BI3 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC15.91■□□□□ 0.14
APH1AQ96BI3 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
APH1AQ96BI3 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
APH1AQ96BI3 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
APH1AQ96BI3 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
APH1AQ96BI3 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
APH1AQ96BI3 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
APH1AQ96BI3 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
APH1AQ96BI3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
APH1AQ96BI3 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
APH1AQ96BI3 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
APH1AQ96BI3 AC233702.3-201ENST00000578656 1387 ntBASIC15.9■□□□□ 0.14
APH1AQ96BI3 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
APH1AQ96BI3 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
APH1AQ96BI3 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
APH1AQ96BI3 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
APH1AQ96BI3 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
APH1AQ96BI3 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
APH1AQ96BI3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
APH1AQ96BI3 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
APH1AQ96BI3 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
APH1AQ96BI3 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
APH1AQ96BI3 BICD1-207ENST00000551848 1962 ntBASIC15.9■□□□□ 0.14
APH1AQ96BI3 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
APH1AQ96BI3 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
APH1AQ96BI3 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
APH1AQ96BI3 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
APH1AQ96BI3 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
APH1AQ96BI3 KRT18P56-201ENST00000507275 550 ntBASIC15.9■□□□□ 0.14
APH1AQ96BI3 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.9■□□□□ 0.14
APH1AQ96BI3 MIR3652-201ENST00000579335 131 ntBASIC15.9■□□□□ 0.14
APH1AQ96BI3 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
APH1AQ96BI3 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.9■□□□□ 0.14
APH1AQ96BI3 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
APH1AQ96BI3 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
APH1AQ96BI3 COMP-202ENST00000425807 2292 ntTSL 2 BASIC15.9■□□□□ 0.14
APH1AQ96BI3 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
APH1AQ96BI3 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.9■□□□□ 0.14
APH1AQ96BI3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
APH1AQ96BI3 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
APH1AQ96BI3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
APH1AQ96BI3 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.9■□□□□ 0.14
APH1AQ96BI3 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
APH1AQ96BI3 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
APH1AQ96BI3 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
APH1AQ96BI3 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.9■□□□□ 0.14
APH1AQ96BI3 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.9■□□□□ 0.14
APH1AQ96BI3 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.9■□□□□ 0.14
APH1AQ96BI3 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.9■□□□□ 0.14
APH1AQ96BI3 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
APH1AQ96BI3 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms