Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
ATP6V0A1Q93050 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
ATP6V0A1Q93050 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP6V0A1Q93050 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP6V0A1Q93050 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP6V0A1Q93050 RNA5SP419-201ENST00000515908 135 ntBASIC20.06■□□□□ 0.8
ATP6V0A1Q93050 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.06■□□□□ 0.8
ATP6V0A1Q93050 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.06■□□□□ 0.8
ATP6V0A1Q93050 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.06■□□□□ 0.8
ATP6V0A1Q93050 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.06■□□□□ 0.8
ATP6V0A1Q93050 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP6V0A1Q93050 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP6V0A1Q93050 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATP6V0A1Q93050 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.06■□□□□ 0.8
ATP6V0A1Q93050 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP6V0A1Q93050 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP6V0A1Q93050 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP6V0A1Q93050 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.06■□□□□ 0.8
ATP6V0A1Q93050 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.06■□□□□ 0.8
ATP6V0A1Q93050 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP6V0A1Q93050 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.05■□□□□ 0.8
ATP6V0A1Q93050 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP6V0A1Q93050 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP6V0A1Q93050 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.05■□□□□ 0.8
ATP6V0A1Q93050 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
ATP6V0A1Q93050 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATP6V0A1Q93050 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ATP6V0A1Q93050 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.05■□□□□ 0.8
ATP6V0A1Q93050 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP6V0A1Q93050 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP6V0A1Q93050 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP6V0A1Q93050 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP6V0A1Q93050 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP6V0A1Q93050 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP6V0A1Q93050 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ATP6V0A1Q93050 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP6V0A1Q93050 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP6V0A1Q93050 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ATP6V0A1Q93050 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP6V0A1Q93050 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.05■□□□□ 0.8
ATP6V0A1Q93050 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.05■□□□□ 0.8
ATP6V0A1Q93050 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.05■□□□□ 0.8
ATP6V0A1Q93050 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
ATP6V0A1Q93050 KRT18P67-201ENST00000432816 1264 ntBASIC20.05■□□□□ 0.8
ATP6V0A1Q93050 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP6V0A1Q93050 AF186996.4-201ENST00000467186 377 ntBASIC20.05■□□□□ 0.8
ATP6V0A1Q93050 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.05■□□□□ 0.8
ATP6V0A1Q93050 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.05■□□□□ 0.8
ATP6V0A1Q93050 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.05■□□□□ 0.8
ATP6V0A1Q93050 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
ATP6V0A1Q93050 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATP6V0A1Q93050 AL138831.2-201ENST00000606564 490 ntBASIC20.05■□□□□ 0.8
ATP6V0A1Q93050 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.05■□□□□ 0.8
ATP6V0A1Q93050 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATP6V0A1Q93050 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP6V0A1Q93050 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATP6V0A1Q93050 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP6V0A1Q93050 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP6V0A1Q93050 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
ATP6V0A1Q93050 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP6V0A1Q93050 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP6V0A1Q93050 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP6V0A1Q93050 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATP6V0A1Q93050 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.04■□□□□ 0.8
ATP6V0A1Q93050 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP6V0A1Q93050 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATP6V0A1Q93050 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATP6V0A1Q93050 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP6V0A1Q93050 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.04■□□□□ 0.8
ATP6V0A1Q93050 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP6V0A1Q93050 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP6V0A1Q93050 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP6V0A1Q93050 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP6V0A1Q93050 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
ATP6V0A1Q93050 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP6V0A1Q93050 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP6V0A1Q93050 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP6V0A1Q93050 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.04■□□□□ 0.8
ATP6V0A1Q93050 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.04■□□□□ 0.8
ATP6V0A1Q93050 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.04■□□□□ 0.8
ATP6V0A1Q93050 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.04■□□□□ 0.8
ATP6V0A1Q93050 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
ATP6V0A1Q93050 AC009533.2-201ENST00000543664 586 ntBASIC20.04■□□□□ 0.8
ATP6V0A1Q93050 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.04■□□□□ 0.8
ATP6V0A1Q93050 AC023511.2-201ENST00000618803 211 ntBASIC20.04■□□□□ 0.8
ATP6V0A1Q93050 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP6V0A1Q93050 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.04■□□□□ 0.8
ATP6V0A1Q93050 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP6V0A1Q93050 AC009113.1-201ENST00000570267 2443 ntBASIC20.04■□□□□ 0.8
ATP6V0A1Q93050 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP6V0A1Q93050 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.04■□□□□ 0.8
ATP6V0A1Q93050 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.04■□□□□ 0.8
ATP6V0A1Q93050 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
ATP6V0A1Q93050 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATP6V0A1Q93050 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP6V0A1Q93050 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
ATP6V0A1Q93050 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.03■□□□□ 0.8
ATP6V0A1Q93050 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20.03■□□□□ 0.8
ATP6V0A1Q93050 AC125634.1-201ENST00000438758 1403 ntBASIC20.03■□□□□ 0.8
ATP6V0A1Q93050 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms