Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.98■□□□□ 0.31
TM9SF4Q92544 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TM9SF4Q92544 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.98■□□□□ 0.31
TM9SF4Q92544 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TM9SF4Q92544 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.98■□□□□ 0.31
TM9SF4Q92544 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TM9SF4Q92544 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TM9SF4Q92544 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TM9SF4Q92544 UNC93B7-201ENST00000509439 705 ntBASIC16.98■□□□□ 0.31
TM9SF4Q92544 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
TM9SF4Q92544 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TM9SF4Q92544 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.98■□□□□ 0.31
TM9SF4Q92544 AC024563.2-201ENST00000603282 481 ntBASIC16.98■□□□□ 0.31
TM9SF4Q92544 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TM9SF4Q92544 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.98■□□□□ 0.31
TM9SF4Q92544 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.98■□□□□ 0.31
TM9SF4Q92544 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
TM9SF4Q92544 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TM9SF4Q92544 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TM9SF4Q92544 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TM9SF4Q92544 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TM9SF4Q92544 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TM9SF4Q92544 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.98■□□□□ 0.31
TM9SF4Q92544 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TM9SF4Q92544 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TM9SF4Q92544 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.98■□□□□ 0.31
TM9SF4Q92544 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TM9SF4Q92544 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.97■□□□□ 0.31
TM9SF4Q92544 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.97■□□□□ 0.31
TM9SF4Q92544 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TM9SF4Q92544 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TM9SF4Q92544 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TM9SF4Q92544 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TM9SF4Q92544 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TM9SF4Q92544 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TM9SF4Q92544 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.97■□□□□ 0.31
TM9SF4Q92544 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TM9SF4Q92544 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.97■□□□□ 0.31
TM9SF4Q92544 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TM9SF4Q92544 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TM9SF4Q92544 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.97■□□□□ 0.31
TM9SF4Q92544 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.97■□□□□ 0.31
TM9SF4Q92544 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TM9SF4Q92544 KRT18P31-201ENST00000506277 1292 ntBASIC16.97■□□□□ 0.31
TM9SF4Q92544 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.97■□□□□ 0.31
TM9SF4Q92544 AC074051.2-201ENST00000565115 352 ntBASIC16.97■□□□□ 0.31
TM9SF4Q92544 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TM9SF4Q92544 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.97■□□□□ 0.31
TM9SF4Q92544 AC083906.6-201ENST00000641366 219 ntBASIC16.97■□□□□ 0.31
TM9SF4Q92544 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TM9SF4Q92544 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TM9SF4Q92544 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TM9SF4Q92544 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TM9SF4Q92544 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TM9SF4Q92544 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TM9SF4Q92544 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TM9SF4Q92544 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.97■□□□□ 0.31
TM9SF4Q92544 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TM9SF4Q92544 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.97■□□□□ 0.31
TM9SF4Q92544 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.97■□□□□ 0.31
TM9SF4Q92544 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TM9SF4Q92544 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.97■□□□□ 0.31
TM9SF4Q92544 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TM9SF4Q92544 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TM9SF4Q92544 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TM9SF4Q92544 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TM9SF4Q92544 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.97■□□□□ 0.31
TM9SF4Q92544 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TM9SF4Q92544 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
TM9SF4Q92544 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TM9SF4Q92544 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.96■□□□□ 0.31
TM9SF4Q92544 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TM9SF4Q92544 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TM9SF4Q92544 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TM9SF4Q92544 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TM9SF4Q92544 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.96■□□□□ 0.31
TM9SF4Q92544 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TM9SF4Q92544 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TM9SF4Q92544 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TM9SF4Q92544 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.96■□□□□ 0.31
TM9SF4Q92544 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.96■□□□□ 0.31
TM9SF4Q92544 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TM9SF4Q92544 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
TM9SF4Q92544 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TM9SF4Q92544 AL732292.2-201ENST00000609649 430 ntBASIC16.96■□□□□ 0.31
TM9SF4Q92544 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TM9SF4Q92544 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TM9SF4Q92544 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TM9SF4Q92544 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.96■□□□□ 0.31
TM9SF4Q92544 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TM9SF4Q92544 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TM9SF4Q92544 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.96■□□□□ 0.3
TM9SF4Q92544 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TM9SF4Q92544 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.96■□□□□ 0.3
TM9SF4Q92544 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TM9SF4Q92544 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TM9SF4Q92544 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TM9SF4Q92544 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TM9SF4Q92544 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TM9SF4Q92544 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms