Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
DDX1Q92499 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
DDX1Q92499 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.14■□□□□ 0.65
DDX1Q92499 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
DDX1Q92499 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
DDX1Q92499 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
DDX1Q92499 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.14■□□□□ 0.65
DDX1Q92499 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DDX1Q92499 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
DDX1Q92499 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
DDX1Q92499 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
DDX1Q92499 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX1Q92499 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
DDX1Q92499 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.13■□□□□ 0.65
DDX1Q92499 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
DDX1Q92499 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX1Q92499 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
DDX1Q92499 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX1Q92499 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX1Q92499 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DDX1Q92499 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.13■□□□□ 0.65
DDX1Q92499 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.13■□□□□ 0.65
DDX1Q92499 KRT17P6-201ENST00000453795 1220 ntBASIC19.13■□□□□ 0.65
DDX1Q92499 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DDX1Q92499 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.13■□□□□ 0.65
DDX1Q92499 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.13■□□□□ 0.65
DDX1Q92499 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.13■□□□□ 0.65
DDX1Q92499 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX1Q92499 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.13■□□□□ 0.65
DDX1Q92499 AC083849.1-201ENST00000615227 514 ntBASIC19.13■□□□□ 0.65
DDX1Q92499 AC022898.2-201ENST00000616822 1312 ntBASIC19.13■□□□□ 0.65
DDX1Q92499 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DDX1Q92499 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.13■□□□□ 0.65
DDX1Q92499 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX1Q92499 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
DDX1Q92499 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.13■□□□□ 0.65
DDX1Q92499 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DDX1Q92499 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX1Q92499 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.13■□□□□ 0.65
DDX1Q92499 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX1Q92499 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX1Q92499 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX1Q92499 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX1Q92499 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX1Q92499 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
DDX1Q92499 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
DDX1Q92499 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX1Q92499 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
DDX1Q92499 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX1Q92499 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.12■□□□□ 0.65
DDX1Q92499 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.12■□□□□ 0.65
DDX1Q92499 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX1Q92499 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.12■□□□□ 0.65
DDX1Q92499 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.12■□□□□ 0.65
DDX1Q92499 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
DDX1Q92499 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
DDX1Q92499 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX1Q92499 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX1Q92499 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX1Q92499 KRT8P47-201ENST00000604727 1398 ntBASIC19.12■□□□□ 0.65
DDX1Q92499 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX1Q92499 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX1Q92499 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX1Q92499 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX1Q92499 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
DDX1Q92499 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.12■□□□□ 0.65
DDX1Q92499 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
DDX1Q92499 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.12■□□□□ 0.65
DDX1Q92499 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.12■□□□□ 0.65
DDX1Q92499 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.12■□□□□ 0.65
DDX1Q92499 PRELID1P1-202ENST00000567272 903 ntBASIC19.12■□□□□ 0.65
DDX1Q92499 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.12■□□□□ 0.65
DDX1Q92499 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.12■□□□□ 0.65
DDX1Q92499 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.12■□□□□ 0.65
DDX1Q92499 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.12■□□□□ 0.65
DDX1Q92499 AC012313.10-201ENST00000623509 926 ntBASIC19.12■□□□□ 0.65
DDX1Q92499 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX1Q92499 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX1Q92499 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
DDX1Q92499 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX1Q92499 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX1Q92499 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
DDX1Q92499 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.11■□□□□ 0.65
DDX1Q92499 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX1Q92499 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
DDX1Q92499 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX1Q92499 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX1Q92499 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.11■□□□□ 0.65
DDX1Q92499 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
DDX1Q92499 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX1Q92499 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
DDX1Q92499 KRT8P10-201ENST00000450021 1447 ntBASIC19.11■□□□□ 0.65
DDX1Q92499 LINC01311-201ENST00000565162 1445 ntBASIC19.11■□□□□ 0.65
DDX1Q92499 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
DDX1Q92499 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX1Q92499 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
DDX1Q92499 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.11■□□□□ 0.65
DDX1Q92499 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX1Q92499 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX1Q92499 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms