Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.87■□□□□ 0.61
RNF139Q8WU17 AC011840.4-201ENST00000578471 627 ntBASIC18.87■□□□□ 0.61
RNF139Q8WU17 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF139Q8WU17 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF139Q8WU17 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
RNF139Q8WU17 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.87■□□□□ 0.61
RNF139Q8WU17 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF139Q8WU17 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.87■□□□□ 0.61
RNF139Q8WU17 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RNF139Q8WU17 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF139Q8WU17 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RNF139Q8WU17 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF139Q8WU17 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF139Q8WU17 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF139Q8WU17 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF139Q8WU17 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF139Q8WU17 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF139Q8WU17 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF139Q8WU17 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF139Q8WU17 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF139Q8WU17 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF139Q8WU17 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF139Q8WU17 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF139Q8WU17 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF139Q8WU17 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RNF139Q8WU17 KRT18P65-201ENST00000439811 1286 ntBASIC18.86■□□□□ 0.61
RNF139Q8WU17 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RNF139Q8WU17 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF139Q8WU17 TPSP2-201ENST00000561760 610 ntBASIC18.86■□□□□ 0.61
RNF139Q8WU17 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF139Q8WU17 MIR3180-1-201ENST00000580374 94 ntBASIC18.86■□□□□ 0.61
RNF139Q8WU17 MIR3180-3-201ENST00000584616 94 ntBASIC18.86■□□□□ 0.61
RNF139Q8WU17 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.86■□□□□ 0.61
RNF139Q8WU17 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.86■□□□□ 0.61
RNF139Q8WU17 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.86■□□□□ 0.61
RNF139Q8WU17 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.86■□□□□ 0.61
RNF139Q8WU17 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF139Q8WU17 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
RNF139Q8WU17 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
RNF139Q8WU17 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF139Q8WU17 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
RNF139Q8WU17 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.85■□□□□ 0.61
RNF139Q8WU17 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF139Q8WU17 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
RNF139Q8WU17 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
RNF139Q8WU17 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF139Q8WU17 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF139Q8WU17 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF139Q8WU17 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.85■□□□□ 0.61
RNF139Q8WU17 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF139Q8WU17 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
RNF139Q8WU17 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF139Q8WU17 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF139Q8WU17 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF139Q8WU17 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF139Q8WU17 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF139Q8WU17 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF139Q8WU17 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
RNF139Q8WU17 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF139Q8WU17 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.85■□□□□ 0.61
RNF139Q8WU17 TOB2P1-201ENST00000469761 992 ntBASIC18.85■□□□□ 0.61
RNF139Q8WU17 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF139Q8WU17 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RNF139Q8WU17 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF139Q8WU17 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF139Q8WU17 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF139Q8WU17 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.85■□□□□ 0.61
RNF139Q8WU17 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF139Q8WU17 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF139Q8WU17 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
RNF139Q8WU17 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
RNF139Q8WU17 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF139Q8WU17 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF139Q8WU17 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
RNF139Q8WU17 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF139Q8WU17 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF139Q8WU17 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.85■□□□□ 0.61
RNF139Q8WU17 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF139Q8WU17 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF139Q8WU17 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.85■□□□□ 0.61
RNF139Q8WU17 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF139Q8WU17 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF139Q8WU17 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF139Q8WU17 AC093010.1-201ENST00000473625 1624 ntBASIC18.85■□□□□ 0.61
RNF139Q8WU17 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF139Q8WU17 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF139Q8WU17 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF139Q8WU17 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF139Q8WU17 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF139Q8WU17 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF139Q8WU17 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RNF139Q8WU17 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF139Q8WU17 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.84■□□□□ 0.61
RNF139Q8WU17 NOC2LP1-202ENST00000452600 2235 ntBASIC18.84■□□□□ 0.61
RNF139Q8WU17 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF139Q8WU17 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
RNF139Q8WU17 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.84■□□□□ 0.61
RNF139Q8WU17 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF139Q8WU17 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.84■□□□□ 0.61
RNF139Q8WU17 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms