Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMARCC2Q8TAQ2 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC21.04■□□□□ 0.96
SMARCC2Q8TAQ2 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC21.04■□□□□ 0.96
SMARCC2Q8TAQ2 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMARCC2Q8TAQ2 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SMARCC2Q8TAQ2 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC21.04■□□□□ 0.96
SMARCC2Q8TAQ2 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC21.04■□□□□ 0.96
SMARCC2Q8TAQ2 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
SMARCC2Q8TAQ2 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SMARCC2Q8TAQ2 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMARCC2Q8TAQ2 CNP-204ENST00000472031 1019 ntTSL 2 BASIC21.04■□□□□ 0.96
SMARCC2Q8TAQ2 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SMARCC2Q8TAQ2 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC21.04■□□□□ 0.96
SMARCC2Q8TAQ2 AC113404.2-201ENST00000507884 177 ntBASIC21.04■□□□□ 0.96
SMARCC2Q8TAQ2 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SMARCC2Q8TAQ2 NAA38-203ENST00000575071 553 ntTSL 2 BASIC21.04■□□□□ 0.96
SMARCC2Q8TAQ2 TK1-205ENST00000590862 642 ntTSL 3 BASIC21.04■□□□□ 0.96
SMARCC2Q8TAQ2 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
SMARCC2Q8TAQ2 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.04■□□□□ 0.96
SMARCC2Q8TAQ2 AC093458.2-201ENST00000623150 629 ntBASIC21.04■□□□□ 0.96
SMARCC2Q8TAQ2 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SMARCC2Q8TAQ2 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC21.04■□□□□ 0.96
SMARCC2Q8TAQ2 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMARCC2Q8TAQ2 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
SMARCC2Q8TAQ2 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC21.04■□□□□ 0.96
SMARCC2Q8TAQ2 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMARCC2Q8TAQ2 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMARCC2Q8TAQ2 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
SMARCC2Q8TAQ2 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMARCC2Q8TAQ2 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMARCC2Q8TAQ2 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMARCC2Q8TAQ2 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMARCC2Q8TAQ2 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SMARCC2Q8TAQ2 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMARCC2Q8TAQ2 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMARCC2Q8TAQ2 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMARCC2Q8TAQ2 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMARCC2Q8TAQ2 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SMARCC2Q8TAQ2 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMARCC2Q8TAQ2 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMARCC2Q8TAQ2 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
SMARCC2Q8TAQ2 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
SMARCC2Q8TAQ2 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC21.03■□□□□ 0.96
SMARCC2Q8TAQ2 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SMARCC2Q8TAQ2 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
SMARCC2Q8TAQ2 AC008687.5-201ENST00000593746 558 ntBASIC21.03■□□□□ 0.96
SMARCC2Q8TAQ2 AC069148.1-201ENST00000608741 768 ntBASIC21.03■□□□□ 0.96
SMARCC2Q8TAQ2 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SMARCC2Q8TAQ2 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC21.03■□□□□ 0.96
SMARCC2Q8TAQ2 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SMARCC2Q8TAQ2 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC21.03■□□□□ 0.96
SMARCC2Q8TAQ2 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMARCC2Q8TAQ2 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMARCC2Q8TAQ2 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC21.02■□□□□ 0.96
SMARCC2Q8TAQ2 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMARCC2Q8TAQ2 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SMARCC2Q8TAQ2 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMARCC2Q8TAQ2 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
SMARCC2Q8TAQ2 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
SMARCC2Q8TAQ2 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SMARCC2Q8TAQ2 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMARCC2Q8TAQ2 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
SMARCC2Q8TAQ2 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
SMARCC2Q8TAQ2 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC21.02■□□□□ 0.96
SMARCC2Q8TAQ2 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC21.02■□□□□ 0.96
SMARCC2Q8TAQ2 KRT18P48-201ENST00000434763 852 ntBASIC21.02■□□□□ 0.96
SMARCC2Q8TAQ2 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SMARCC2Q8TAQ2 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC21.02■□□□□ 0.96
SMARCC2Q8TAQ2 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
SMARCC2Q8TAQ2 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC21.02■□□□□ 0.96
SMARCC2Q8TAQ2 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMARCC2Q8TAQ2 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC21.02■□□□□ 0.96
SMARCC2Q8TAQ2 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC21.02■□□□□ 0.96
SMARCC2Q8TAQ2 AC011498.5-201ENST00000592027 486 ntBASIC21.02■□□□□ 0.96
SMARCC2Q8TAQ2 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
SMARCC2Q8TAQ2 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SMARCC2Q8TAQ2 WDR6-223ENST00000627177 207 ntTSL 2 BASIC21.02■□□□□ 0.96
SMARCC2Q8TAQ2 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SMARCC2Q8TAQ2 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMARCC2Q8TAQ2 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
SMARCC2Q8TAQ2 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SMARCC2Q8TAQ2 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.95
SMARCC2Q8TAQ2 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMARCC2Q8TAQ2 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMARCC2Q8TAQ2 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMARCC2Q8TAQ2 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMARCC2Q8TAQ2 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC21.01■□□□□ 0.95
SMARCC2Q8TAQ2 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMARCC2Q8TAQ2 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC21.01■□□□□ 0.95
SMARCC2Q8TAQ2 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SMARCC2Q8TAQ2 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC21.01■□□□□ 0.95
SMARCC2Q8TAQ2 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMARCC2Q8TAQ2 HES2-202ENST00000377836 507 ntTSL 2 BASIC21.01■□□□□ 0.95
SMARCC2Q8TAQ2 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC21.01■□□□□ 0.95
SMARCC2Q8TAQ2 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC21.01■□□□□ 0.95
SMARCC2Q8TAQ2 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC21.01■□□□□ 0.95
SMARCC2Q8TAQ2 AP003733.1-201ENST00000491725 852 ntBASIC21.01■□□□□ 0.95
SMARCC2Q8TAQ2 AC024563.2-201ENST00000603282 481 ntBASIC21.01■□□□□ 0.95
SMARCC2Q8TAQ2 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC21.01■□□□□ 0.95
SMARCC2Q8TAQ2 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms