Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.95■□□□□ 0.3
SIMC1Q8NDZ2 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SIMC1Q8NDZ2 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
SIMC1Q8NDZ2 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SIMC1Q8NDZ2 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SIMC1Q8NDZ2 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SIMC1Q8NDZ2 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SIMC1Q8NDZ2 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SIMC1Q8NDZ2 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.95■□□□□ 0.3
SIMC1Q8NDZ2 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.95■□□□□ 0.3
SIMC1Q8NDZ2 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SIMC1Q8NDZ2 NTF6B-201ENST00000591913 560 ntBASIC16.95■□□□□ 0.3
SIMC1Q8NDZ2 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.95■□□□□ 0.3
SIMC1Q8NDZ2 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SIMC1Q8NDZ2 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.95■□□□□ 0.3
SIMC1Q8NDZ2 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SIMC1Q8NDZ2 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.95■□□□□ 0.3
SIMC1Q8NDZ2 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SIMC1Q8NDZ2 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SIMC1Q8NDZ2 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SIMC1Q8NDZ2 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.95■□□□□ 0.3
SIMC1Q8NDZ2 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
SIMC1Q8NDZ2 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SIMC1Q8NDZ2 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SIMC1Q8NDZ2 LINC01311-201ENST00000565162 1445 ntBASIC16.95■□□□□ 0.3
SIMC1Q8NDZ2 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.95■□□□□ 0.3
SIMC1Q8NDZ2 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SIMC1Q8NDZ2 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.95■□□□□ 0.3
SIMC1Q8NDZ2 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
SIMC1Q8NDZ2 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SIMC1Q8NDZ2 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SIMC1Q8NDZ2 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SIMC1Q8NDZ2 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.94■□□□□ 0.3
SIMC1Q8NDZ2 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SIMC1Q8NDZ2 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SIMC1Q8NDZ2 AC138028.4-201ENST00000564984 1845 ntBASIC16.94■□□□□ 0.3
SIMC1Q8NDZ2 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.94■□□□□ 0.3
SIMC1Q8NDZ2 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SIMC1Q8NDZ2 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SIMC1Q8NDZ2 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SIMC1Q8NDZ2 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SIMC1Q8NDZ2 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SIMC1Q8NDZ2 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SIMC1Q8NDZ2 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SIMC1Q8NDZ2 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.94■□□□□ 0.3
SIMC1Q8NDZ2 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SIMC1Q8NDZ2 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.94■□□□□ 0.3
SIMC1Q8NDZ2 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SIMC1Q8NDZ2 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.94■□□□□ 0.3
SIMC1Q8NDZ2 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
SIMC1Q8NDZ2 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
SIMC1Q8NDZ2 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.94■□□□□ 0.3
SIMC1Q8NDZ2 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.94■□□□□ 0.3
SIMC1Q8NDZ2 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SIMC1Q8NDZ2 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SIMC1Q8NDZ2 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SIMC1Q8NDZ2 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
SIMC1Q8NDZ2 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.94■□□□□ 0.3
SIMC1Q8NDZ2 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SIMC1Q8NDZ2 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SIMC1Q8NDZ2 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.94■□□□□ 0.3
SIMC1Q8NDZ2 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SIMC1Q8NDZ2 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.94■□□□□ 0.3
SIMC1Q8NDZ2 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
SIMC1Q8NDZ2 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.93■□□□□ 0.3
SIMC1Q8NDZ2 LINC00602-201ENST00000629776 2065 ntBASIC16.93■□□□□ 0.3
SIMC1Q8NDZ2 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SIMC1Q8NDZ2 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SIMC1Q8NDZ2 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SIMC1Q8NDZ2 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SIMC1Q8NDZ2 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SIMC1Q8NDZ2 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.93■□□□□ 0.3
SIMC1Q8NDZ2 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SIMC1Q8NDZ2 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SIMC1Q8NDZ2 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.93■□□□□ 0.3
SIMC1Q8NDZ2 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.93■□□□□ 0.3
SIMC1Q8NDZ2 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SIMC1Q8NDZ2 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SIMC1Q8NDZ2 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SIMC1Q8NDZ2 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SIMC1Q8NDZ2 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SIMC1Q8NDZ2 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SIMC1Q8NDZ2 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SIMC1Q8NDZ2 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SIMC1Q8NDZ2 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.93■□□□□ 0.3
SIMC1Q8NDZ2 AL671277.2-201ENST00000458060 996 ntBASIC16.93■□□□□ 0.3
SIMC1Q8NDZ2 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.93■□□□□ 0.3
SIMC1Q8NDZ2 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.93■□□□□ 0.3
SIMC1Q8NDZ2 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.93■□□□□ 0.3
SIMC1Q8NDZ2 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.93■□□□□ 0.3
SIMC1Q8NDZ2 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SIMC1Q8NDZ2 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SIMC1Q8NDZ2 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SIMC1Q8NDZ2 LINC00167-201ENST00000530583 1419 ntBASIC16.93■□□□□ 0.3
SIMC1Q8NDZ2 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SIMC1Q8NDZ2 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SIMC1Q8NDZ2 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.93■□□□□ 0.3
SIMC1Q8NDZ2 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SIMC1Q8NDZ2 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.93■□□□□ 0.3
SIMC1Q8NDZ2 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms