Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
KDM1BQ8NB78 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.34■□□□□ 0.53
KDM1BQ8NB78 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KDM1BQ8NB78 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
KDM1BQ8NB78 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.34■□□□□ 0.53
KDM1BQ8NB78 LINC00602-201ENST00000629776 2065 ntBASIC18.34■□□□□ 0.53
KDM1BQ8NB78 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KDM1BQ8NB78 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.33■□□□□ 0.53
KDM1BQ8NB78 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KDM1BQ8NB78 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.33■□□□□ 0.53
KDM1BQ8NB78 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.33■□□□□ 0.53
KDM1BQ8NB78 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KDM1BQ8NB78 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KDM1BQ8NB78 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
KDM1BQ8NB78 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
KDM1BQ8NB78 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KDM1BQ8NB78 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.33■□□□□ 0.52
KDM1BQ8NB78 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KDM1BQ8NB78 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
KDM1BQ8NB78 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KDM1BQ8NB78 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KDM1BQ8NB78 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KDM1BQ8NB78 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KDM1BQ8NB78 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.33■□□□□ 0.52
KDM1BQ8NB78 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
KDM1BQ8NB78 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
KDM1BQ8NB78 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KDM1BQ8NB78 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KDM1BQ8NB78 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.33■□□□□ 0.52
KDM1BQ8NB78 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
KDM1BQ8NB78 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
KDM1BQ8NB78 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
KDM1BQ8NB78 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KDM1BQ8NB78 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
KDM1BQ8NB78 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
KDM1BQ8NB78 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
KDM1BQ8NB78 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KDM1BQ8NB78 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KDM1BQ8NB78 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KDM1BQ8NB78 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
KDM1BQ8NB78 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
KDM1BQ8NB78 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
KDM1BQ8NB78 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KDM1BQ8NB78 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
KDM1BQ8NB78 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.32■□□□□ 0.52
KDM1BQ8NB78 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.32■□□□□ 0.52
KDM1BQ8NB78 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
KDM1BQ8NB78 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.32■□□□□ 0.52
KDM1BQ8NB78 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
KDM1BQ8NB78 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
KDM1BQ8NB78 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KDM1BQ8NB78 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KDM1BQ8NB78 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
KDM1BQ8NB78 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KDM1BQ8NB78 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KDM1BQ8NB78 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
KDM1BQ8NB78 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KDM1BQ8NB78 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
KDM1BQ8NB78 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KDM1BQ8NB78 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.32■□□□□ 0.52
KDM1BQ8NB78 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
KDM1BQ8NB78 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.32■□□□□ 0.52
KDM1BQ8NB78 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KDM1BQ8NB78 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
KDM1BQ8NB78 BNIP3P18-201ENST00000593976 575 ntBASIC18.32■□□□□ 0.52
KDM1BQ8NB78 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
KDM1BQ8NB78 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.32■□□□□ 0.52
KDM1BQ8NB78 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KDM1BQ8NB78 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.32■□□□□ 0.52
KDM1BQ8NB78 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.32■□□□□ 0.52
KDM1BQ8NB78 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KDM1BQ8NB78 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
KDM1BQ8NB78 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KDM1BQ8NB78 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KDM1BQ8NB78 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.32■□□□□ 0.52
KDM1BQ8NB78 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
KDM1BQ8NB78 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KDM1BQ8NB78 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.32■□□□□ 0.52
KDM1BQ8NB78 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KDM1BQ8NB78 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
KDM1BQ8NB78 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
KDM1BQ8NB78 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KDM1BQ8NB78 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.31■□□□□ 0.52
KDM1BQ8NB78 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
KDM1BQ8NB78 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KDM1BQ8NB78 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
KDM1BQ8NB78 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.31■□□□□ 0.52
KDM1BQ8NB78 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.31■□□□□ 0.52
KDM1BQ8NB78 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.31■□□□□ 0.52
KDM1BQ8NB78 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KDM1BQ8NB78 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KDM1BQ8NB78 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KDM1BQ8NB78 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
KDM1BQ8NB78 AC009533.2-201ENST00000543664 586 ntBASIC18.31■□□□□ 0.52
KDM1BQ8NB78 AC114341.1-201ENST00000618070 349 ntBASIC18.31■□□□□ 0.52
KDM1BQ8NB78 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
KDM1BQ8NB78 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KDM1BQ8NB78 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KDM1BQ8NB78 AP000997.3-201ENST00000623333 2250 ntBASIC18.31■□□□□ 0.52
KDM1BQ8NB78 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms